Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g00162 ATGTTCCCTTCAACGACAACGATGGGAAGCACCACCGTGTTGAGCCTCCCTCTCGGCAAACCCAACGCCAGGGTGGCTCCAAAACTCACCGTTTCGAAGGTGGCCGACAAGCTGAACAACCTGACCTCGGAGTTCAGGTCCCTGTCGGAGCCGATCGAGCGCGTGAAGCGGCTCCTGCACTACGCGTCGCTGCTGCCGCCGATGGGGGCGGCGGAGAGGGTCCCGGAGAACCGCGTGGCGGGGTGCGCGACGGAGGTGTGGGTGGTGGCGGAGGTGGACGAGCGGCGGAGGATGCGGTTCCGCGCGGACAGCGACTCGGAGATCTCGAAGGGCTTCTGCTGGTGCCTCGTCTGGATGCTCGACGGCGCCCTACCCGAGGACCTTCTCTTGCTTCACACAGACCATTTCCAACACATCAACGTTGGCTTAGGGATCACCCTCAAGGCCCAATCAAGGACCAACACGTGGCACAATGTTTTCTTCCACATGCAGAATGCTACTAGGGATTTCATCATTAATTGA 522 0.6054 MFPSTTTMGSTTVLSLPLGKPNARVAPKLTVSKVADKLNNLTSEFRSLSEPIERVKRLLHYASLLPPMGAAERVPENRVAGCATEVWVVAEVDERRRMRFRADSDSEISKGFCWCLVWMLDGALPEDLLLLHTDHFQHINVGLGITLKAQSRTNTWHNVFFHMQNATRDFIIN 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g00162 173 Pfam Fe-S metabolism associated domain 43 165 IPR003808 -
Cca01g00162 173 PANTHER SUFE-LIKE PROTEIN 2, CHLOROPLASTIC 26 171 - -
Cca01g00162 173 PANTHER SULFUR ACCEPTOR PROTEIN CSDE 26 171 IPR003808 -
Cca01g00162 173 Gene3D - 24 169 - -
Cca01g00162 173 SUPERFAMILY SufE/NifU 36 171 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g00162 - - vun:114193886 215.312
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca01g00162 01 1580840 1581724 Cca01g00162 01 1580840 1581724 ECH