Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g00155 ATGGCATTGCTGATGATCCCGAACCTGATTGGAGCTTCGACGCTCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTGATTGGAGCTTCGACGCTCTTGTTTCGGAGCTCAACGCTTTGGAGGCGAAGCTCGCTACCAACGCTTCTTCCACCTTCGAACGTTCTTCTCCTTACACTAAAACGATATCGCGTGAGAAGAAAATTGAGAGAGGTAGAGCTTTCGTGCTGCGTGCCGATGAGTATGAGATGGAGGACACAGATAGTGAGGATGATTATGGTGATGACAAAGCTTTAGTAGCAGCTGGCAGTGGCAAACGGTTCACTTGCGATGAACTTTATCTCAGTGACAGTGATGATTCTGACATTGTCTCTGGTTTTGAAGTGAGACCCTACTTAATGGATGAATTGGGAGAGGTAGAAGGTGCCTTGTTTGAGTTGACACATGAACATCAACTTAGGGTTAAGGATGAAATTAGGAACAAGATTTCAGCCCTGGAGACAGCTCTGGTGAACGAAACTCAGAACTCTACTTCTTCCCTTCTTCGAGTTGAGAAGTATAAAGAAACAAGGCAGGAATTGGATAAAAAGTTTGACACTCAATATCAGCGTCGGATTGCAGAAGCACTTGATAATCACTTGACAGCTGTTCAACGGGACCGTGAACTAAGATCACAAATAGAAGAAAGGAAAATAAGAAGTGATGCAGCTTATGAAGAGGCCAAGAGAAAGGTTGCTTTTGAAAAGCAGCAGCAAGAAAAGGCTAAAGCTGAAGCAGAGGCCAAACTTAGAGCTGAGGAAGCAAAACGAGCTGCATTGGAAGCGGAGAGAAAAGCAGAAATGGAAGCCAAAAAACAGGCAGCAATGGAAGCTGAAAAAAGAGCAGCAGAAGCTGAAAGGAGAGCCGAAAAGGAATCTACTGAAACTTCCAAAAGGGTTACTCCTGGAGGGACCCAACCATCTGCTGGGCATCCAACAGATACTGCATCAAACCTATCAAATGCTGAAAACAAGGAATCTGGTAATATGTATAGAGCTGCAACAAATGCTTTGAATCTAGAGCATGGGAGACTGCAGAAACTGAAAGAGCTATTTGAGAAAAACCAAGTGATAAGATCAAGTTATAATAAGGATTATACCCGCCATGAGGGTCATATTTCCCGGAATATTAGGCAAATAAGGGGCATAAGAGACAATGTTAGGTCAAAAGCAAGTGAACTCATTAAACTTTTGAATGATCCTCAATGTCCTCAATCAATCAGCATTGAGATATTTGCTAAAAAGGTTGTTTCATACTGTGAAAACCCCGGTAATGCTCCCTTTGCTAGTGCCTACGTCATTGTTCTCGTTACATCTCAGGTCCCACATGCTATGGATATTTTTCTAGCTGAGCTTCACATGGCTTGCCTATATACCGTCCCAAAGCACCTGGTTTACAAGAAGTCCGCTTTCCAATCAAAAGAGGCATACTTCAAAAGTATTGGTTATCGAGAAGATGAAGGAAAGATAGAGAGTACAGAAGATTATTTAAAGCGGTTAGAGTCATACATGAAGGTGTATGGTGCACTGGTTCAGACTGAAACTACAAACGTTCAAAATTTGCACGGCTTGAAAGAAGGTTGGGCATGGCTTGCAAGGTTCTTGAACACACTCCCAGCAAATCAATACACAGCTGTTTCGCTCAATGCATTCTTGCAAATGGCTGGATTTGCTCTCTATAAAAGATATAAATTTCAATTCTTGAAGATGCTGAACGTTGTCTCGAAGAACTTTTTAGTTGATCTGAAATCACGGAATATACCAGAATTAACGAGGACGATTACGGAGATACAGACTTACATAGAAGATAAGAAGTTCCTTCAAGAGCCAGAAGGAAGGAGCCTGCAGTCTAATTTGTTATCAAATGTATATGTTAATTATTGA 2016 0.3934 MALLMIPNLIGASTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDWSFDALVSELNALEAKLATNASSTFERSSPYTKTISREKKIERGRAFVLRADEYEMEDTDSEDDYGDDKALVAAGSGKRFTCDELYLSDSDDSDIVSGFEVRPYLMDELGEVEGALFELTHEHQLRVKDEIRNKISALETALVNETQNSTSSLLRVEKYKETRQELDKKFDTQYQRRIAEALDNHLTAVQRDRELRSQIEERKIRSDAAYEEAKRKVAFEKQQQEKAKAEAEAKLRAEEAKRAALEAERKAEMEAKKQAAMEAEKRAAEAERRAEKESTETSKRVTPGGTQPSAGHPTDTASNLSNAENKESGNMYRAATNALNLEHGRLQKLKELFEKNQVIRSSYNKDYTRHEGHISRNIRQIRGIRDNVRSKASELIKLLNDPQCPQSISIEIFAKKVVSYCENPGNAPFASAYVIVLVTSQVPHAMDIFLAELHMACLYTVPKHLVYKKSAFQSKEAYFKSIGYREDEGKIESTEDYLKRLESYMKVYGALVQTETTNVQNLHGLKEGWAWLARFLNTLPANQYTAVSLNAFLQMAGFALYKRYKFQFLKMLNVVSKNFLVDLKSRNIPELTRTITEIQTYIEDKKFLQEPEGRSLQSNLLSNVYVNY 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g00155 671 MobiDBLite consensus disorder prediction 342 378 - -
Cca01g00155 671 Gene3D - 375 653 IPR038506 -
Cca01g00155 671 Coils Coil 269 339 - -
Cca01g00155 671 Pfam GLE1-like protein 393 618 IPR012476 GO:0005643|GO:0016973
Cca01g00155 671 MobiDBLite consensus disorder prediction 305 379 - -
Cca01g00155 671 PANTHER GLE-1-RELATED 63 661 IPR012476 GO:0005643|GO:0016973
Cca01g00155 671 MobiDBLite consensus disorder prediction 305 341 - -
Cca01g00155 671 Coils Coil 187 207 - -
Cca01g00155 671 Coils Coil 15 15 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g00155 K18723 - gmx:100802744 887.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca01g00155 01 1519903 1527442 Cca01g00155 01 1519903 1527442 ECH