Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g00150 ATGAGGCTTCGACTTCCCAGTTCAGCCGCCATGATTCGTTGTAACTCACTTCACAACCAGATTGTTTCAAACCTTGGAAGTGAAGAGTTTACACAGAAGGTACTCAACAGAAGATGGACACTGCCAAGCCCCGAAACAAAAATTCACCAACTAATCCACACACAAGCCCCTACTCTTTTATTGAACACCCATCCATCTTTTGGTGTCCATGATAAACAAAGCAAGTACTTTTACATCGTTCGGGATGATTTGTTGCACCCTCTTGTTAATGGCAACAAAGCAAGAAAACTCGATGCACTACTCCCTCTGCTTCACCATTCTTCTGTCACTGATGTGGTTACATGTGGAGGTTGTCAGAGTGCTCACACAGCTGCTATTGCTGTTCTGTGTGCTGAGAGAGGAATTGTGTCACATCTGCTTCTACGAGGAGAGCAGCCTGAAATCTTGACTGGCTATAACTTGATGTCTACTATGTATGGAAATGTCACATATGTTCCAAGAACTGTTTATGCCAACAGGGAAGAGATGCTAAAGAGCTATGCTAATTCAGTGGCTGGTAACAATGGTTCTGTCCTATGGTTCAGTGATATCATTCAGGCTTCTTCAGCATCTGAATTGTCCACTTCTCCAAATTTTATGCAAATGGATGTAAGTAGAAGCGAGGGGAACCATCTACGAAAGATTTTAGTTGTCAATGAAGGTGCTGGTGATTCTGTTGCTCTACTAGGTGTTATTCGTTTAGTGCAATACTTATCACAGGATCATTTACTTGGAAAACAAAGGCCCATAAAATTTGTTGTAGATGCTGGTACAGGCACAACAGCTGTTGGTTTAGGACTTGCAGCTCATTGCTTAGGACTCCCATGGGAGGTATATGCTGTCATGCTGGCTGACAAAATTGATGGGTATAGAAAACAGGAGGAGCGTTTGATTTCTGAATTCAAGAAACATTTTAACATTGAGTTTATTGACTTCAACAGAGAAGGTGCGGGGATAGTGAATTGGGTGGAACGTGGCCGTCCAAGAAAATTTGGCAATGTTTTGGAAGGGGAAGTGGAAGCATGTCAGCAAATTGCCCAACAAACTGGGATTCTGGTGGATCCTGTGTATACATTAGCTGCTTGGGAAACAGCAATGCTTCTCTCTAGCAAAGAAGCTGAAGAAGGACCAGAAGTTGTGTTGCTTCACACTGGAGGCACGTTGGGTATGTTTGGGTTGGCTCAGAGGTACACAAATTATTTTGGCATGCTCAAAAAAGGACCGGATCAATTTTAG 1275 0.429 MRLRLPSSAAMIRCNSLHNQIVSNLGSEEFTQKVLNRRWTLPSPETKIHQLIHTQAPTLLLNTHPSFGVHDKQSKYFYIVRDDLLHPLVNGNKARKLDALLPLLHHSSVTDVVTCGGCQSAHTAAIAVLCAERGIVSHLLLRGEQPEILTGYNLMSTMYGNVTYVPRTVYANREEMLKSYANSVAGNNGSVLWFSDIIQASSASELSTSPNFMQMDVSRSEGNHLRKILVVNEGAGDSVALLGVIRLVQYLSQDHLLGKQRPIKFVVDAGTGTTAVGLGLAAHCLGLPWEVYAVMLADKIDGYRKQEERLISEFKKHFNIEFIDFNREGAGIVNWVERGRPRKFGNVLEGEVEACQQIAQQTGILVDPVYTLAAWETAMLLSSKEAEEGPEVVLLHTGGTLGMFGLAQRYTNYFGMLKKGPDQF 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g00150 424 Gene3D - 209 413 IPR036052 -
Cca01g00150 424 Gene3D - 92 194 IPR036052 -
Cca01g00150 424 PANTHER 1-AMINOCYCLOPROPANE-1-CARBOXYLATE DEAMINASE-RELATED 20 419 IPR027278 -
Cca01g00150 424 SUPERFAMILY Tryptophan synthase beta subunit-like PLP-dependent enzymes 76 411 IPR036052 -
Cca01g00150 424 PANTHER D-CYSTEINE DESULFHYDRASE 2, MITOCHONDRIAL 20 419 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g00150 K05396 - gmx:100801680 728.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca01g00150 01 1465998 1469905 Cca01g00150 01 1465998 1469905 ECH