Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g00133 ATGTCTGATAATCACGTAGCGGAGCAGCATTCGGATTCGGGTCCTCGTGTGGGGCACGACCAATCAAATGCGGATACCGAATCAAACACTGATACTTTTCAAGATCAGGGGGAGCGTGTTGATCCCAGAGATGGAGTTGAGGGGGACCATGAAGATGGAAAATCTGCAGAGGATACTGCCAGAGATGACATGTTTGTTGATTGCCCTGATGAGTTAACCACATTTGATGGTAGGCAAAAGGAGGAAGAAGCTGAAGCTGCAGCTGCGAAAAATGAAGATGACGTGTCGGACGAAAATCAAGTTATGCATCAACAACAGAGGCATTCTGTTGAATTGCGCAATGGAGTGGGAGATGCTTACTCCCCAGCCCAGCTGGAGGAAGCTGATCCTGAAAAAGAAAGTATTTTGCAGGAATACCAGGAAGAAAGACAAACTGTCACTCGGGGAGTGCTTGATCTTCATTGTCAGCTAAAGACTCTCACTGGTCAACAGAATGAAGCTAAAGTTGGAGATAGGGAAGTGACTGATGTTCCATTGAGGGAGATGATAAAAGAATGTATGGAGTTTGTGAAAACTGCCTCAGAAGAGCGATCAAACAGTGAAACCACTGTAAGTAATCTTCGTGAACATCTATCTGTGAAGGACCGTGAGATAGAGGATCTTAATTCAAAGCTTGCTCAATTGATGGCGTCTAATGAAAGTTTGCAGGCTTCACCTGAAGCTCAGCCTGAAAAAGATCGTAATGTTGAGATTGTGATAGATAAGATGATATCCTCTCTTGCATCAGTTGTTACTCGAGAGCAAGTATTGGATGATACTATTAACGGGAAAATAGATTATATTGAGGAAGGCACTGCACATTTAATTGAAAAGTATAATCAGATTCTTTATGAAATTTATCAGCTTGGGCAATCTTTCTCTGAGGTAGGATTCGATACTAAAGAACAGGAATATGGGAACATACTTGCTGATGCTCGTGGTGGGTTACTGGAGCTCAAAAGAAAGGAAACAGAATTGGTTGAAAAACTGGCTCAGTTAGAAGATGAAAACCGGAAACTGGTGGACAATCTTGACAAGGAAAAGGTGAAAATAGGGACATTAAATTCTGAACTTGGAAATCTGAAAATGGAGCTTGAGCAGGAAAAGGTTAAATGTACTAATACCAAAGAAAAGCTTAGTATGGCTGTGACAAAAGGAAAGGCTTTGGTACAGCAGCGAGATTCATTAAAGATGTCTCTGGCTGATAAATCCAGTGAGCTTGAGAAATGTTTGATTGAATTGCAAGAGAAGTCAGTTGCACTTCAAGCTGCTGAACTTGTTAAGGAGGAGTTGGTCCAACGTGAAGATATGGTTGGGTCCCTGCAGAACTCATTAGAGGAAAAGAATGCAATTTTGGAGCAAGTGGAAGAAATCTTATCTCTTGCCAAACCTGATGAAAATGAAATGGTTGATGTGTCAGAGAGACTAAGTTGGCTTGTGGATGAAAGAAATACACTGAAGGATGCCTTCCTAGAGTTATGCAATGTGAAGGAAGCTCTATCTCTAGTGGACCTTCCAGAGCCTGTTTCATCATCTGATTTGGAATCCCAAATGAATTGGCTTATGGATTCTTTTCTTAGGGCCCGGGATGATATGCATACTCTACAGGAACAAATTTCCACAATCAAGGAAGAATCTTGCAAGTATATTGATCGCCTGAGTGTTTCTCTTTTGCTGGAGTTACAGGAAAAAGATTATCTTCTGTCAGAATTAAATGATTTGAGGTTCGAATATGATGAACTTGTTGGCAAGAACAATCAGATTTCTCTGGAGAAGGATCAGATAGTGAATACATTAGTCGATCTTTGTGGCCTGAACATTGAAGAGGAAGCGATTGATCAAATCTCTTCCAACACTTCTACAATCGCCAATTTATGCTTTCAAGTTATAAAAGAACAGAGTGGTCCCTTCTCTAGAGGATCTCATATTGATGCGGAGTTGTCTGACAGGATTCAAAGTCTCTTGTATGTTAGAGATCAGGGATTAATGCTCTATGAAGATATACTGGAAGAAGAGATGCTACTTAGATCAGATGTGAGTAAGCTGTCAAATGAGTTGAAAGTGGCATCTGAGGCAATTATAGCAATGAAAGAGGAAAGGAGTTCTCTGCTGCAAGATCTTGAACGATCAGAGGAGAAGATTGCCATGCTTAGGGATAAGTTGTCGATGGCAGTTAAGAAAGGAAAGGGGCTGGTTCAAGATAGGGACAATCTAAAAGGTCTTCTAAATGAAAAGAACTCAGAGATTGAGCAGTTGAAGATTGATTTACAGAAGCAAGAATCTGCAGTTTCTGAATACAGGGAGGAGATCAACAGATTGTCTAATGATGTGGAAAGCATTTCGAAGCTGGAGGCTGATCTTCTTGAAATGAAAAGGGACAGGAATCAGTTTGAACAGTTCTTAACAGAGAGCAATAACATGTTGCAGAAAGTGATGGAGTGTATTGATGGTATTGTTCTTCCAGTTGATCCAGTTTTTGATGAACCAATAGAAAAGGTGAAGTGGCTTGCTGGTTATGTCAGCGAATGCCAAGATGCTAAGGTACGTGTAGAACAAGAGTTGCATCTAGAGAAGGAGAAGGTCAGTGTACTTGAAATTAAATTAGCAGAAGCCCAAGCAACTGTAAAATCCCTTGAACAGGAATTATTATCTTCAGATGACAATGTTTCTCAACTTGCTGAAGAAAAAACAGAGTTAGAACGTGGGAAGGCAAAAGTTGAGGAAGAGTTAAGTAAAGTTAAAGAAAAAATTGCTGAGGTTTGTAGCACTACTAAGTCACTTGAAGATGCCTTGTCACAAGCAGAAAAAGATATTTCTATTCTTTCCGAAGAGAAACAGCAGACTCAAGTTAGTAGAGTTGCTGCAGAGCGAGAGTTAGAGAGTGTTAAAGATGAAGCACTCAAGCAAACAAGCAAACTGGCAGAGGCCTACAGGACCATAAAGGATCTAGAAGATAAACTATCTCAGGTTGAGGATAATGTCAATTTATTGACTGAAAAGTATAATGCCGATCAAATTGTGAAGAATGACATGGAAAATGAATTGAAGAAGCTGCAAGATGAAGCTGCAAATCACGATAGCAAATTGGTAGGTGCCTCTGAAACTATAAAATCACTGGAGGGTGCATTATCAAAGGCACAAGATGATATTTCTGCCTTAGAAGATGCAAATAAAATTGCAAAACAGGAGATATCTTCCCTTGGTTTTAAGTTAAATTCATGCATGGATGAGTTGGCTGGAAAGAATGGCAGCTTAGAAAACAGGTCCTTACAGCTCGTTGAACTTCTTAATGATCTTCAGGTGCTCATGAAAGACACTACTCTATTTCCCAGAATAAAACAATGCTTTGAGAGGAAATGTGAGACCCTGAAGAACATGAATCTTGTTGTGAACAAAATAAGAGATAATGTTGCCTTGACTGCAAATGAATCAAAAGAAGAGCTTGTGATGGAGGAAAATCCACTTGTGGGAAAAACATTCTTGGATGGCCTTGAAACTTTTGAAATTGAACTAGACAATAGAGAGGTCGAGGGTGCCGATATTGACACCATAATCTCATTATTTGAAAATATTGCGAAAGGATTTCATTTCAGAAACAAACACATTGCAGATAAGTTTGATGAATTTTCGGATTCTATGGATGAGTTTATTTCTCCTCTCCATGAAAAACTACTGGAAACAGAGACCATCTCAACAGCTATTGTTGGGCACATGGAAATTATGAAAGAAAAAACAAATACAATGGAGAAGTTGAAAGAAGACCAGGAAAACATTATTGCCACATTAGAAAATAATGTCAGTGTATTGCTATCTGCATGCATTGATTCTACTGTTGCACTTCAGACTGAAGTTGACAAGAATCTTGGGCAGGCAGGCTCCATTTCTGATGTTAAGTTAAACCTTGAAGCAGGTGCACAAGAAGAACATCAGAAGAACAGCAAATATGTGGAAGCCACACAAAATTTGATGAatgcttctagaaaagctcaaactttgattgaacagttcaaatgtagaagtgagcaggtagatgcaacaattgaagatttgcagaataaattgaaagaaacaacagatgcttttaaACTAGTGACAGATGAGAGAGACTTGAATAAAAACAGAGTTTTGGAGCTGGAGTCTGACATTCAAGCACTACAAAGTGCTTGTGGTGAGCTTAAGGATAAGTTAGAGGGTTATCGTGCCCTAGAAGAAAAAATCGAGGAAAAAGAGGCTGAGATTTCATCAATGCACAATGCTTTTAAATTAGTCACAGAAGAGAGAGACTTGAATAAAAACAGAGTTTTGCAGCTGGAGTCTGATATTCAATCACTGCAAAATGCTTGTAGTGAGCTTAAGAATAAGTTAGAGGGTTATCGCATCCTAGAAGAAAAGTTGGAGGAAAAAGAGTCTGAGATTTCATCAATGCGCAATGCTTTTGAATTAGTCACAGATGAGAGAGACTTTAATAAAAACAGAGTTTTGCAGCTGGAGTCTGATATTCAATCAGTGCAAAATGCTTGTAGTGAGCTTAAGGATAAATCAGAGGGTTATCATGCCCTAGAAGAAAAATTGGAGGAAAAAGAGGCTGAGATTTCATCAATGCACAATGCTTTGTTGGCAAAAGAAGAAGAAAGCTCCCTCCTTCCAGCATCTCAAATGAGAGATCTCTTTGACAAGATAGATAGGTTCAAAATCCCTATTGTAGAGTCTGAAGAAGATGATTTGGAGCCACATACTTCAGCTCCTATGAAAAAACTCTTTTACATTATTGATAGTGTTACAAGGTTGCATAATCAAATAAACTCTGTGTCTCATGATAAAGAAAAGCTGCAATCAATCCTTGAAACTAAGGATCTTGAAATTCAGGATCTGAAGGAGGAAGTCAAACAGCTCAATAGAAATTATGAAGACTCAAAAATGATCAAGAATGAATTGTCTGAGCTCACCTATTTATTAGAAAAAATTATGGATATTTTGGGAGCCAGTGAATGGGTAATAGATAGAAAATCTAAAGGTGTAAAGGAATTAATGCCAGCTTTGGAAAAGCATATCAATGGCATTCTATCAGAATCTGAAAATTCAAAATCAAAGGCCCTGGAACTTGATATTAAGTTAGTTGGCAGTCAGAAGATTATTGATGAATTAAGGACAAAGGTTAAATTACTTGAAGATTCACTCCAAGATAGGACTTCTCAACCAGACATTGTCCAGGAGAGGAGCATATATGAAGCATCCTCGTTAGCTTCTGGATCTGAAATAACTGAAGTTGAAGAGGGATCACTTGGCAAGAAACCAATTTCTCCTGTCCCACCGGCTGCTCATGTGCGGAATATGCGAAAAGGATCTACTGATCATCTAGCACTTGATATTAGTTTGGAGTCTGATAATTTGATCAAGAGGGCAGATAAGGATGAAGATAAAGGCCATCTATTCAAGTCTCTGAACACTTCTGGATTTGTACCGAAACAGGGAAAGCTCATTGCAGATCGTATTGATGGACTCTGGGTATCTGGTGGTAGGGTTCTTATGAGTCGTCCTAGAGCAAGATTAGGGCTTATTGGTTATGTGCTTATCTTGCATATGTGGCTACTGGTGACGATCTTGTAG 5646 0.3842 MSDNHVAEQHSDSGPRVGHDQSNADTESNTDTFQDQGERVDPRDGVEGDHEDGKSAEDTARDDMFVDCPDELTTFDGRQKEEEAEAAAAKNEDDVSDENQVMHQQQRHSVELRNGVGDAYSPAQLEEADPEKESILQEYQEERQTVTRGVLDLHCQLKTLTGQQNEAKVGDREVTDVPLREMIKECMEFVKTASEERSNSETTVSNLREHLSVKDREIEDLNSKLAQLMASNESLQASPEAQPEKDRNVEIVIDKMISSLASVVTREQVLDDTINGKIDYIEEGTAHLIEKYNQILYEIYQLGQSFSEVGFDTKEQEYGNILADARGGLLELKRKETELVEKLAQLEDENRKLVDNLDKEKVKIGTLNSELGNLKMELEQEKVKCTNTKEKLSMAVTKGKALVQQRDSLKMSLADKSSELEKCLIELQEKSVALQAAELVKEELVQREDMVGSLQNSLEEKNAILEQVEEILSLAKPDENEMVDVSERLSWLVDERNTLKDAFLELCNVKEALSLVDLPEPVSSSDLESQMNWLMDSFLRARDDMHTLQEQISTIKEESCKYIDRLSVSLLLELQEKDYLLSELNDLRFEYDELVGKNNQISLEKDQIVNTLVDLCGLNIEEEAIDQISSNTSTIANLCFQVIKEQSGPFSRGSHIDAELSDRIQSLLYVRDQGLMLYEDILEEEMLLRSDVSKLSNELKVASEAIIAMKEERSSLLQDLERSEEKIAMLRDKLSMAVKKGKGLVQDRDNLKGLLNEKNSEIEQLKIDLQKQESAVSEYREEINRLSNDVESISKLEADLLEMKRDRNQFEQFLTESNNMLQKVMECIDGIVLPVDPVFDEPIEKVKWLAGYVSECQDAKVRVEQELHLEKEKVSVLEIKLAEAQATVKSLEQELLSSDDNVSQLAEEKTELERGKAKVEEELSKVKEKIAEVCSTTKSLEDALSQAEKDISILSEEKQQTQVSRVAAERELESVKDEALKQTSKLAEAYRTIKDLEDKLSQVEDNVNLLTEKYNADQIVKNDMENELKKLQDEAANHDSKLVGASETIKSLEGALSKAQDDISALEDANKIAKQEISSLGFKLNSCMDELAGKNGSLENRSLQLVELLNDLQVLMKDTTLFPRIKQCFERKCETLKNMNLVVNKIRDNVALTANESKEELVMEENPLVGKTFLDGLETFEIELDNREVEGADIDTIISLFENIAKGFHFRNKHIADKFDEFSDSMDEFISPLHEKLLETETISTAIVGHMEIMKEKTNTMEKLKEDQENIIATLENNVSVLLSACIDSTVALQTEVDKNLGQAGSISDVKLNLEAGAQEEHQKNSKYVEATQNLMNASRKAQTLIEQFKCRSEQVDATIEDLQNKLKETTDAFKLVTDERDLNKNRVLELESDIQALQSACGELKDKLEGYRALEEKIEEKEAEISSMHNAFKLVTEERDLNKNRVLQLESDIQSLQNACSELKNKLEGYRILEEKLEEKESEISSMRNAFELVTDERDFNKNRVLQLESDIQSVQNACSELKDKSEGYHALEEKLEEKEAEISSMHNALLAKEEESSLLPASQMRDLFDKIDRFKIPIVESEEDDLEPHTSAPMKKLFYIIDSVTRLHNQINSVSHDKEKLQSILETKDLEIQDLKEEVKQLNRNYEDSKMIKNELSELTYLLEKIMDILGASEWVIDRKSKGVKELMPALEKHINGILSESENSKSKALELDIKLVGSQKIIDELRTKVKLLEDSLQDRTSQPDIVQERSIYEASSLASGSEITEVEEGSLGKKPISPVPPAAHVRNMRKGSTDHLALDISLESDNLIKRADKDEDKGHLFKSLNTSGFVPKQGKLIADRIDGLWVSGGRVLMSRPRARLGLIGYVLILHMWLLVTIL 1881
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g00133 1881 Coils Coil 1254 1278 - -
Cca01g00133 1881 Coils Coil 451 471 - -
Cca01g00133 1881 Coils Coil 1328 1380 - -
Cca01g00133 1881 Coils Coil 204 238 - -
Cca01g00133 1881 MobiDBLite consensus disorder prediction 1 15 - -
Cca01g00133 1881 Coils Coil 1388 1432 - -
Cca01g00133 1881 MobiDBLite consensus disorder prediction 1 106 - -
Cca01g00133 1881 Coils Coil 1620 1661 - -
Cca01g00133 1881 PANTHER BNAA09G28150D PROTEIN 1495 1881 - -
Cca01g00133 1881 PANTHER BNAA09G28150D PROTEIN 1436 1491 - -
Cca01g00133 1881 PANTHER BNAA09G28150D PROTEIN 961 1013 - -
Cca01g00133 1881 PANTHER BNAA09G28150D PROTEIN 1018 1070 - -
Cca01g00133 1881 PANTHER BNAA09G28150D PROTEIN 42 915 - -
Cca01g00133 1881 PANTHER BNAA09G28150D PROTEIN 916 965 - -
Cca01g00133 1881 PANTHER BNAA09G28150D PROTEIN 1075 1432 - -
Cca01g00133 1881 Coils Coil 1506 1557 - -
Cca01g00133 1881 MobiDBLite consensus disorder prediction 16 31 - -
Cca01g00133 1881 PANTHER - 1495 1881 - -
Cca01g00133 1881 PANTHER - 42 915 - -
Cca01g00133 1881 PANTHER - 916 965 - -
Cca01g00133 1881 PANTHER - 1018 1070 - -
Cca01g00133 1881 PANTHER - 1075 1432 - -
Cca01g00133 1881 PANTHER - 961 1013 - -
Cca01g00133 1881 PANTHER - 1436 1491 - -
Cca01g00133 1881 Coils Coil 1440 1498 - -
Cca01g00133 1881 Coils Coil 692 740 - -
Cca01g00133 1881 MobiDBLite consensus disorder prediction 32 101 - -
Cca01g00133 1881 Coils Coil 867 1076 - -
Cca01g00133 1881 Coils Coil 538 558 - -
Cca01g00133 1881 Coils Coil 748 796 - -
Cca01g00133 1881 Coils Coil 329 391 - -
Cca01g00133 1881 Coils Coil 1725 1745 - -
Cca01g00133 1881 SUPERFAMILY Tropomyosin 840 1091 - -
Cca01g00133 1881 Gene3D - 984 1149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g00133 Cca-Chr1 1312000 1320262 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g00133 - - ccaj:109802875 3561.54