Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g00130 ATGGCTGAGTCATCGGCGTGTCTCGTACGGTCCTTTTCCACTCCCGCGGACACTTGTTACGAGGGTAATCCTATTCGTGCGCTTGGAGAATCTATCTCGTTTGGGAGGTTTATGTCAGAAGAACTGGATTGGGAGAAATGGTCAACATTCACGCACAATCGCTATGTTGAAGAAGCCGAAAAATATTCGAAGCCGGGTTCTGTTGCGGCGAAGAAAGCCTATTTTGAGGCTCGTTACAAAAGAAAAGCTGCGGAGAGAGCAGCTGCATGGGTCCAAGAAGCAAATGCTCTGGCTAATGGAACTACTGAGTCATCCATTGACACGAGTTGTATAGTGGAAAATGAAGAGCATGATAAAGAAATTGTTGATTACCATGTTGTCGAATGTGTTGTTGATAGAGACCAACAAAAATGTGATGCCGGACAGAGTGATTTATGCGTTTCCAATACCAATGACGTGGTTGCGAATGAAGAACAGGATAAGGAAACTGTTAATTACCGTGTTGTTGAATGTGTAGTTAATAAAGACCAACATGAATGTGATGCTGGACAAAGTGATTTAGGCATTTTGAATGTGGAAGAAGCAGAGGATTCGCGGCATCCTCGCATTGATATATATCTTAATGTGGAAAGTTGCACACTTGATGATGATTCTAATTCTAGCCAGTTTCATCATGTTGAAGATAAAAAGAATATTGTTGTCCCTGTGGAAGTTTTGGCTTTGTCTGTCAAGGGAAGAGAAGCAAATTCTTCTCCAGAATTATCAACCGAAACTGTGTCTCAAGAAAATTCTCCTTCTCTTGATGAAAGGAAGGATGCTGCAGCTGTGCCAACCCCCCAAAGTGGAATAAACAATGGTTCTAAAGGCAAGAAGTCTGTTAGTGGAGACTCAGTTGAGAAGAAGAATTTAACTGCACGGTCGACACGTGAAACACGCAAAAGAGTGGCAGTGGCTTTACAGTCCAGAAATGGCTTAAACAATTTTTCAACAAGTAAGAAGTCTGTTGGAGGCTTGAATGAGAAGAAAAAAATAACTGCACCATCATCTGGTACTGGTATAACAAGCAAAACTGTTACTGCAGCTACTAAACCCTCTGCAAAAAGTATGAAGTCTGTTGGACACTCAGTGGAGAAGAGACCAACTACAAGGTCACTCCACATGTCAATCAGTCTGCCTTCTGGTGCAGGTGAAACAAGTAAAACAGCTTCAATGTTGGAACAGAACAGAGTAAAAAGACTTCATTCTAATTTTCCCAAAACTAAGGCTTCTCATGGTTTGCTAAATCAAGATCCAGTAAATCACCCTTCTCAAAGACCGCTTAATAAGTCTGTATCTGGAGGTGTTACAGCAAATGCAAAGCCTTCCTCATCCTCAAACACCATAAAAAACATTCCCCAATCAGCTACCGTATCTTCACCTTTTAGATTCAGAAGTGAAGAAAGAGCAGTTAAACGCAAAGAGTTCTTGCAGAGAATGGATGAAACTAAATCCAAGGACGAAGAGAAAGTTAAATTGCAAAGGACTCTCAAGGGTAAAACAGAGCATGATCACAAGAAGTTGCGGCAGAGCAGCGGCTCTATATCCAAACTAAATGAGGACAAGCAAAGTGGATCACACTCACCAAGTAATCAGATTAGAAAGAGTTCACTTGCACTGCCCCGGTCACCAAAACTTGGGAAGAAAGCAAGTTCTAGCATAGTCCAAGGCAAAAGCTTAGGAAATTCATGGAAGCCTCCTATCAGAACCAACAATTCCAAACGTACTACAGAAAAAATTAACCGAACAACAAGGCAATCAGTAACTTCAATATCAAATACCACCAGAGAAAATGCTTCACCAAATATTCAGCTTTAA 1854 0.4126 MAESSACLVRSFSTPADTCYEGNPIRALGESISFGRFMSEELDWEKWSTFTHNRYVEEAEKYSKPGSVAAKKAYFEARYKRKAAERAAAWVQEANALANGTTESSIDTSCIVENEEHDKEIVDYHVVECVVDRDQQKCDAGQSDLCVSNTNDVVANEEQDKETVNYRVVECVVNKDQHECDAGQSDLGILNVEEAEDSRHPRIDIYLNVESCTLDDDSNSSQFHHVEDKKNIVVPVEVLALSVKGREANSSPELSTETVSQENSPSLDERKDAAAVPTPQSGINNGSKGKKSVSGDSVEKKNLTARSTRETRKRVAVALQSRNGLNNFSTSKKSVGGLNEKKKITAPSSGTGITSKTVTAATKPSAKSMKSVGHSVEKRPTTRSLHMSISLPSGAGETSKTASMLEQNRVKRLHSNFPKTKASHGLLNQDPVNHPSQRPLNKSVSGGVTANAKPSSSSNTIKNIPQSATVSSPFRFRSEERAVKRKEFLQRMDETKSKDEEKVKLQRTLKGKTEHDHKKLRQSSGSISKLNEDKQSGSHSPSNQIRKSSLALPRSPKLGKKASSSIVQGKSLGNSWKPPIRTNNSKRTTEKINRTTRQSVTSISNTTRENASPNIQL 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g00130 617 MobiDBLite consensus disorder prediction 278 292 - -
Cca01g00130 617 MobiDBLite consensus disorder prediction 344 369 - -
Cca01g00130 617 MobiDBLite consensus disorder prediction 594 617 - -
Cca01g00130 617 MobiDBLite consensus disorder prediction 487 523 - -
Cca01g00130 617 MobiDBLite consensus disorder prediction 487 617 - -
Cca01g00130 617 MobiDBLite consensus disorder prediction 421 473 - -
Cca01g00130 617 MobiDBLite consensus disorder prediction 248 263 - -
Cca01g00130 617 PANTHER TPX2 (TARGETING PROTEIN FOR XKLP2) PROTEIN FAMILY-RELATED 1 616 IPR044216 -
Cca01g00130 617 MobiDBLite consensus disorder prediction 293 316 - -
Cca01g00130 617 MobiDBLite consensus disorder prediction 320 335 - -
Cca01g00130 617 MobiDBLite consensus disorder prediction 420 473 - -
Cca01g00130 617 Pfam Targeting protein for Xklp2 (TPX2) domain 474 523 IPR027329 -
Cca01g00130 617 MobiDBLite consensus disorder prediction 524 550 - -
Cca01g00130 617 MobiDBLite consensus disorder prediction 245 402 - -
Cca01g00130 617 MobiDBLite consensus disorder prediction 561 586 - -
Cca01g00130 617 MobiDBLite consensus disorder prediction 382 402 - -
Cca01g00130 617 PANTHER TPX2 (TARGETING PROTEIN FOR XKLP2) PROTEIN FAMILY 1 616 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g00130 Cca-Chr1 1275567 1279477 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g00130 - - ccaj:109803696 1125.92