Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g00114 ATGGCTGCCAACAGATGGTTGAAACCCGAGGTGTACCCACTTTTCGCTGCAGTTGGTGTAGCTGTTGGGATCTGTGGAATGCAACTCGTTAGGAATATAACCACAAATCCTGAAGTCAGGGTGACCAAACAGAACAGAACTGCAGGAATTCTTGAGAATTTTGCAGAGGGAGAGAAATATTCACAACATAGCTTGAGGAAGTATGTTCGCAACAAGCAACCTCAGATTATGCCATCCCTCAACAACTTCTTCTCTGACCCCAGAAACTAA 270 0.4481 MAANRWLKPEVYPLFAAVGVAVGICGMQLVRNITTNPEVRVTKQNRTAGILENFAEGEKYSQHSLRKYVRNKQPQIMPSLNNFFSDPRN 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g00114 89 Pfam NADH-ubiquinone reductase complex 1 MLRQ subunit 8 75 IPR010530 -
Cca01g00114 89 PANTHER OS07G0274700 PROTEIN 2 88 - -
Cca01g00114 89 PANTHER G-BOX BINDING PROTEIN 2 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g00114 Cca-Chr1 1136773 1138236 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g00114 - - gmx:100527541 177.178