Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g00113 ATGACATACATGTTCAAGTACGACACCGTTCATGGCCAGTGGAAGCATTTTGATCTCACGGTGAAGGACTCCAAGACCCTTCTATTCGGTGAGAAGTCTGTCGCTGTTTTTGGTATCAGGAACCCTGAGGAGATTCCATGGGGTGAAGCTGGTGCTGACTTTGTTGTTGAGTCCACTGGTGTCTTCACTGACAAGGATAAGGCTGCTGCTCACTTGAAGGGTGGTGCCAAGAAGGTTGTCATTTCTGCCCCAagcaaagatgcacccatgtttgttgttggtgttaacgagaaggaatacaagccagagcttgacattgtttctaatgctagctgcactaccaattgccttgctcctctcgccaagATACACCCACGCACTGGAAGCTATGAAGAAACTTTACAAGGAGCAGAGTCACGAGATAAAGACTTTCAAGCGAAAACTGAAAAGCTCCGGACTCTCAAAGATGTTGCTTCCAAGACCAAGTTTGGAGAAAGGATTGCAATTCTAGAAGCACAAATACAAAATTTGGAAAGAGAGTGGACTGACACTGATGATAAAAGTTCTAACCTTCAGAAGACTATTCCTCATTTCATCCATGAGATTAGCAAGCTACAAAATGAAGCAGATGCTCACTTGTCTTTGAAGAATGAACGTGATTCCTCCATTCACAATATTTTTGCTAGATATAATTTAGGATCTCTTCCAATGTCACCATTCAGTGATGAGGTTGTTTTAAACCCCACTAATCGTGTAAAATTGAGGTTGGCAGATCTTGAGAAGGATCTGGGTGATGAAAAGGTAATTTTTCTGTTCTCTCATTTGTTTTATGGGTGTATGTTCACTTTTAGGTGTCTGTGTGTTAGGGTGATAGCTAACCGTCACCAGGGAATAGGGAAGGAATCCTAA 909 0.3696 MTYMFKYDTVHGQWKHFDLTVKDSKTLLFGEKSVAVFGIRNPEEIPWGEAGADFVVESTGVFTDKDKAAAHLKGGAKKVVISAPSKDAPMFVVGVNEKEYKPELDIVSNASCTTNCLAPLAKIHPRTGSYEETLQGAESRDKDFQAKTEKLRTLKDVASKTKFGERIAILEAQIQNLEREWTDTDDKSSNLQKTIPHFIHEISKLQNEADAHLSLKNERDSSIHNIFARYNLGSLPMSPFSDEVVLNPTNRVKLRLADLEKDLGDEKVIFLFSHLFYGCMFTFRCLCVRVIANRHQGIGKES 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g00113 302 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1 123 IPR036291 -
Cca01g00113 302 Pfam Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 1 65 IPR020828 GO:0051287
Cca01g00113 302 PANTHER GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE 1 128 - -
Cca01g00113 302 SMART gp_dh_n_7 1 112 IPR020828 GO:0051287
Cca01g00113 302 ProSitePatterns Glyceraldehyde 3-phosphate dehydrogenase active site. 110 117 IPR020830 GO:0016620
Cca01g00113 302 PANTHER GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE 1 128 IPR020831 GO:0016620
Cca01g00113 302 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 106 124 IPR020831 GO:0016620
Cca01g00113 302 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 71 84 IPR020831 GO:0016620
Cca01g00113 302 Coils Coil 160 187 - -
Cca01g00113 302 Gene3D - 1 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g00113 Cca-Chr1 1122538 1130230 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g00113 K00134 - gmx:100782924 230.335