Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g00106 ATGAGTGAGGTGGCAGCTACGACGTCGTCTTCAATGATGCGCAATTACCCTCTCATTTCCGCCATTGTTGCTTTCGCCATCGCACAATTCATCAAGTTTTTCACCGCCTGGTATAAGGAAAAAAGATGGGATCCGAAGCAACTTATTGGATCTGGTGGAATGCCTTCGTCCCATTCAGCTACTGTCACTGCTCTTGCCGCTGCAATTGGGTTCCATGAAGGCTTTGGAGGGCCTCTTTTTGCTACAGCTTTGGTTCTGGCTCTTATTGTGATGTATGATGCTACTGGTGTAAGGTTGCAAGCGGGACGCCAAGCAGAGCTTTTGAACCAAATTGTGTTCGAACTTCCTGCTGAACATCCTCTGCCTGAAAGCAGACCTCTCCGGGAACTTCTTGGGCATACCCCTCCTCAGGTCATTGCCGGGGGGATACTTGGACTTGTAACAGCAGCTATTGGCTATCTAATAACCATGACTAGTAGTTGA 483 0.4845 MSEVAATTSSSMMRNYPLISAIVAFAIAQFIKFFTAWYKEKRWDPKQLIGSGGMPSSHSATVTALAAAIGFHEGFGGPLFATALVLALIVMYDATGVRLQAGRQAELLNQIVFELPAEHPLPESRPLRELLGHTPPQVIAGGILGLVTAAIGYLITMTSS 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g00106 160 Pfam Divergent PAP2 family 14 147 IPR003832 -
Cca01g00106 160 CDD PAP2_like 18 153 - -
Cca01g00106 160 PANTHER - 6 158 - -
Cca01g00106 160 PANTHER ACID PHOSPHATASE/VANADIUM-DEPENDENT HALOPEROXIDASE-RELATED PROTEIN 6 158 IPR003832 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g00106 Cca-Chr1 1056450 1059312 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g00106 K09775 - gmx:100815344 291.582