Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g00105 ATGGGGTTTCTAAGGTTTATGAGAAGGAATAATTACCCCTTCAAGGACAAAACTCGAAATAGAGCATACGCAATTCAGCATATGCAACACAGAGGCTTCTCAAAGGATGGAGTTCTTAATGGCAATGATGTGGTACATCCAATTCTGATCATTGGCGCAGGACCTGTGGGTCTTGTTCTCTCTATTCTTCTCACAAAATTAGGTATTAATTGCACAGTTTTGGAGAGAAACAAGGCATTTTCAAAACATCCACAAGCACATTTCATCAACAATCGGTCCATGGAGATATTCCGCAAAATTGATGGCCTTGTTGAAGAAATTCAAAGGTCTCAACCACCAGTAGATTTATGGAGGAAATTTATATATTGTACTTCCCTCTCTGGTTCAATTCTTGGATCTGTAGATCACATACAACCTCAAGATCTTGAGCAAGTTGTCAGCCCAGTCTCTGTTGCACACTTCTCACAGTACAAGCTGACTATGTTACTACTCAAGCAACTTGAAAATCTAGGCTTTCAAACATGTGCACCTGAAAGCTTGGGAGGAAAGGAACAGTCTTGTGATAAAAAGATAATGATGGGCCATGAGTGTGTAGCCATTGATTCCAGCAATGACTTTGTAACAGTGACTGCATCTTCTATCATTAAAGGGAAGCGTGTAGAACAGAACATTCACTGTAACATCCTTATTGGTACAGATGGTGCAGCAAGTACTGTAAGAAAGCTTGTAGGAATAGAAATGAGAGGTGAGAAGGACTTGCAAAAACTTGTCAGTATCCATTTCTTTAGTAGAGACCTTGGACAGTTTTTGCTTAAGGAGAATCCTGGTATGCTTTTTTTTATCTTCAATACTGAAGCTATTGGGGTCCTTGTTGCTCATGATCTCAGGCAAGGGGAATTTGTATTTCAGATACCCTTTTATCCACCTCAGCAAACAATTGAGGATTTCAGTCCAAAGGCATGTAAGAAATTAATCAGCAAACTTGTTGGTCGAGAGTTTGGAGATGTAAATGTAATTGATATAAAGCCATGGATTATGCATGCTGAAGTAGCCGAGAGGTTTATATGTAGTGGCAACCGAATATTACTTGCTGGTGATGCTGCTCATCGTTTTCCTCCTGCTGGTGGATTTGGAATGAATACTGGCATTCAGGATGCCCATAATCTTGCCTGGAAAATTGCTTCTGTGATTAAGGGTATTGCCCCATCTTCGATGCTAAATACCTATGAAATCGAACGTAAACCGATTGCTTTATTCAATACAAGATTAAGTCTAGAAAACTATAAAGCTGCCATGTCTGTTCCTGCTGCACTTGGTCTTGATCCAACTATTGCAAACACAGTACATCAATTTATTATTAATGGGATTGGTTCCATCTTACCATCCGGATTGCAGAAGGTAGCTTTGGACGGAATTTTTGGTATAGGACGTGCACAGGTCTCAGAATTTGTCCTAAATGAAAGCAACCCTCTTGGATCCTCAAGGTTGGCTAAGCTAAGACGTATATTGGAAGAAGGAAAAAGCCTTCAACTTCAGTTCCCTGCAGAAGATCTTGGTTTTAGGTACCTACAAGGAGCACTTGTGCCAGAGAGTTATAATGTTGAGAGTCCTCCAGAAGTATTAACAGGGCGTAGGAGGGACTACACCCCTTCGGCACAGTCAGGATCAAGATTGCCTCATATGTTTGTGAGAGTAAACCCATTAAGTGAGGAGACTGTTTCTACACTTGATCTTGTGTCAGGAGATACAGTTGAGTTCATTCTCATCATAGCACCTGTGGAGGAATCTTATCGTCTAGCCTGTGAAGCATTCAAGGTGGCTGAGGAACTAGAAATTTCTCTCAAAGTGTGTATTTTTTGGTCTACTGATTCTGCTGAAGGACTTGAGGAAGGAAGTAAAGCAGCACTATCTCCTTGGAAGAATTATACAGATGTTGTTGAAGTTCGGTCATCAACTTCAAATTGGTGGGGTATGTGTAACATCACAAACAGAGGGGCTATTTTAGTTAGACCTGATGAACATATTGCCTGGAGTACAAGTTCAGGAGTTGCTGGGGATCCTAGAGTGGAAATGCAAAGGGTTTTTTCTGCTATATTGGGAGTACACCGTTATAATAAATAA 2121 0.4059 MGFLRFMRRNNYPFKDKTRNRAYAIQHMQHRGFSKDGVLNGNDVVHPILIIGAGPVGLVLSILLTKLGINCTVLERNKAFSKHPQAHFINNRSMEIFRKIDGLVEEIQRSQPPVDLWRKFIYCTSLSGSILGSVDHIQPQDLEQVVSPVSVAHFSQYKLTMLLLKQLENLGFQTCAPESLGGKEQSCDKKIMMGHECVAIDSSNDFVTVTASSIIKGKRVEQNIHCNILIGTDGAASTVRKLVGIEMRGEKDLQKLVSIHFFSRDLGQFLLKENPGMLFFIFNTEAIGVLVAHDLRQGEFVFQIPFYPPQQTIEDFSPKACKKLISKLVGREFGDVNVIDIKPWIMHAEVAERFICSGNRILLAGDAAHRFPPAGGFGMNTGIQDAHNLAWKIASVIKGIAPSSMLNTYEIERKPIALFNTRLSLENYKAAMSVPAALGLDPTIANTVHQFIINGIGSILPSGLQKVALDGIFGIGRAQVSEFVLNESNPLGSSRLAKLRRILEEGKSLQLQFPAEDLGFRYLQGALVPESYNVESPPEVLTGRRRDYTPSAQSGSRLPHMFVRVNPLSEETVSTLDLVSGDTVEFILIIAPVEESYRLACEAFKVAEELEISLKVCIFWSTDSAEGLEEGSKAALSPWKNYTDVVEVRSSTSNWWGMCNITNRGAILVRPDEHIAWSTSSGVAGDPRVEMQRVFSAILGVHRYNK 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g00105 706 Gene3D - 114 353 - -
Cca01g00105 706 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 47 69 - -
Cca01g00105 706 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 225 240 - -
Cca01g00105 706 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 358 373 - -
Cca01g00105 706 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 373 389 - -
Cca01g00105 706 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 391 409 - -
Cca01g00105 706 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 409 425 - -
Cca01g00105 706 Pfam FAD binding domain 47 417 IPR002938 GO:0071949
Cca01g00105 706 PANTHER TRK SYSTEM POTASSIUM UPTAKE PROTEIN 46 697 - -
Cca01g00105 706 SUPERFAMILY FAD/NAD(P)-binding domain 47 438 IPR036188 -
Cca01g00105 706 Gene3D - 47 417 IPR036188 -
Cca01g00105 706 Gene3D - 515 701 - -
Cca01g00105 706 PANTHER FAD/NAD(P)-BINDING OXIDOREDUCTASE FAMILY PROTEIN 46 697 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g00105 - - gmx:100794253 1311.59