Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g00098 ATGTTTGGCTCTGCGCAACCTTCTTCTCCTTTCGGCACTCCCTCTTCAACCCCCGCATTCGGCACACCTTCTTCCACACCTGCGTTCGGTACACCTTCCTTCGCTACACCTTCTTCCACACCAGCGTTCGGTACACCGTCTTCTACACCTGCGTTCGGTGCTTCTTCTACACCAGCGTTCGGTTCCTCCCTCTTCTCCACACCCTTCTCTTCTcaaccgcaacaacagcaacaaacgccactctttcaacaacaacaacagccacaacCTTCTAACGCTTTCGGTTTTCAAAACTCCCTCGCGCCGCCGCAACCCTCTCCGTTCTCAAATGCTCAATTAACCACTCAGATGGCCAACGTGGCACCTGTTCCGTTCTCTCTCGCGGATCGCGATGTTCAGGCTATCCTTGATGCTTACAAGGAAGATCCTGGAAACCCCAAGTACGCTTTTAAGCATTTGTTGTTCAGTGTAACAGAACCGCAGTTTAGAGTGAAGCCTGCTGGTGTGTCAGACATCATGTGGGCAGAGGCGATGGGTAAGCTTGAGGGTATGGAAAGTGCTGACAGAGAACGTCTGTGGCCACAACTTGCTCAGGGTTTTAAGGATCTTTCACAACGTCTTAAGATACAAGATGAAGTCATTGTTTCTGATGCAGAGAGATTACGTGTAACCCAAAGCAATGTTAAAATGCTCCAGAGACATTTTCAAGCTGATACTCTTCCGTGGATTCAAAGGCTGAAACAAAAAGAACAAATTCTACAGCAACGTCTTTTAAGAGTAATGAGAATAGTAGAGGCTTTGGAGGGAAAAGGCTGCCGTATACCCTTAACAAAAGGGGAAGCTGAACTTGCTGAGAAATTAGCGACAATAACCAGACAGCTGAAAGGATCTGGATCGGAATTGTCTAGAAGGGTACAAAATCTACTAACTGTATCTCGTGGTAAAGCGAACAGCAATGGATTTGGTGGCTCCGTTTATCTTCCGGGGTCAACCAAAATTCATGAACAGAGTCTTACTGACCTACAGGAGGTTTTACAGCAGCAGATGGAGGCCATTGGAAGACTTGGCGGTGTTCTGAAGCGAGATATACGGGATATGGAGATTATGATGCATGAGGACACAGGAATGGAAATGGGAATTTAA 1143 0.4488 MFGSAQPSSPFGTPSSTPAFGTPSSTPAFGTPSFATPSSTPAFGTPSSTPAFGASSTPAFGSSLFSTPFSSQPQQQQQTPLFQQQQQPQPSNAFGFQNSLAPPQPSPFSNAQLTTQMANVAPVPFSLADRDVQAILDAYKEDPGNPKYAFKHLLFSVTEPQFRVKPAGVSDIMWAEAMGKLEGMESADRERLWPQLAQGFKDLSQRLKIQDEVIVSDAERLRVTQSNVKMLQRHFQADTLPWIQRLKQKEQILQQRLLRVMRIVEALEGKGCRIPLTKGEAELAEKLATITRQLKGSGSELSRRVQNLLTVSRGKANSNGFGGSVYLPGSTKIHEQSLTDLQEVLQQQMEAIGRLGGVLKRDIRDMEIMMHEDTGMEMGI 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g00098 380 Pfam Nucleoporin complex subunit 54 165 309 IPR025712 -
Cca01g00098 380 MobiDBLite consensus disorder prediction 1 110 - -
Cca01g00098 380 PANTHER NUCLEOPORIN P54 1 375 - -
Cca01g00098 380 PANTHER NUCLEOPORIN P54 1 375 IPR024864 GO:0005643
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g00098 K14308 - gmx:100797030 603.979