Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g00092 ATGCGTCTCGTTAGAATCAAAATCAATGTCACCTCCATAGCCATCTGCGCTGCCTCTCCTTCTTCCTCCCTTGCTCACGCTTCAGATCATGCAACATGTGGCTCCTCCGCGTGGATTGGTAAAGGATTCACTTGTGTTTGCTTCAAGCGAAAGGGAAACTATCAACGAATCTGCTATAGCTTAACCCCTTTACAGGAGGAAAGACTGAGAAGACTAAAGCGCCGAATGAAAGTTTTCTTTGATGCTTCTAGGCTTGATCACCAGGATGCATTGAGAGCTCTGTGGTCTGCTTCGTTCCCTGGTCAGGAGCTCCAAAGCTTGATTTCTGACCAATGGAAAGAAATGGGATGGCAGGGTAGAGATCCATCTACTGATTTCAGAGGAGCTGGTTTCATTTCTTTGGAGAACTTACTATTCTTTGCAAAGACATTCTCAATTTCTTTTCAGCGCATATTGAAGAAACAAGGAGGAAAAGGAGCTATTTGGGAGTATCCCTTTGCTGCTGCTGGGGTTAATATCACATTTATGATCATGCAAATGCTGGACCTTGATGCTACCAAACCCATGACTTTTGTAAGAGCAGTTTTTTTACAGATGCTTTCAGAAAATGAGTGGGCATTCGACTTGCTTTATTGCGTGGCATTCGTGGTTATGGACAAACAGTGGCGGGAGAGGAATGCTACATATATGGAATTTAATGATGTCTTGAAACGCACGCGACTTCAGCTAGAGAAAGAGTTGTTGATGGGTGATGTTCTACGGATTGAAGACATGCCTTCTTTCAGTCTTCTTTTTTGA 798 0.4348 MRLVRIKINVTSIAICAASPSSSLAHASDHATCGSSAWIGKGFTCVCFKRKGNYQRICYSLTPLQEERLRRLKRRMKVFFDASRLDHQDALRALWSASFPGQELQSLISDQWKEMGWQGRDPSTDFRGAGFISLENLLFFAKTFSISFQRILKKQGGKGAIWEYPFAAAGVNITFMIMQMLDLDATKPMTFVRAVFLQMLSENEWAFDLLYCVAFVVMDKQWRERNATYMEFNDVLKRTRLQLEKELLMGDVLRIEDMPSFSLLF 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g00092 265 PANTHER ELMO/CED-12 FAMILY PROTEIN 18 264 - -
Cca01g00092 265 ProSiteProfiles ELMO domain profile. 86 247 IPR006816 -
Cca01g00092 265 PANTHER ENGULFMENT AND CELL MOTILITY 18 264 - -
Cca01g00092 265 Pfam ELMO/CED-12 family 71 236 IPR006816 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g00092 Cca-Chr1 933224 938215 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g00092 K23538 - gmx:100794586 449.899