Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cca01g00089 | ATGGAGTTTTCTCAAGAAGATTTTGATCGCTTACTGTTATTCGAGCACACGCGAAAGACCGCTGAAGCAAAGTACGCTGAAAACCCTCTCGACGCCGATAATCTGACCAAATGGGGAGGAGCTTTGATCGAGTTGTCCGCATTCCAAAACCCTAGGGATTCCAAGACAATGATTGATGATGCCATTTCGAAGCTGGAGGAGGCTTTGTTGCTGAATCCAACGAAGCATGACACTCTTTGGTGCTTGGGAAATGGGCACACGTCTTACGCGTTTCTAACGCCTGATACAGCCGAGGCAAAGGGTTATTTTGACAAGGCGCATGAGTATTTTCAGAAAGCTGTAGATGAGGATCCTGGGAATGAGCTCTATACAAAATCCTTGGAAGTTGCTGTGAAGGCCCCTGAACTACACATGGAGATCCATAAAAATGGGCTTGGCCAGATGAATAGCACCGGATTCTCCGCCACTTCAAAAGGAAAGGAATCTAAAAGGCAGAAGAGCAATGACCTGAAGTATGACATATTTGGATGGATTATTCTTGCAGTGGGTATAGTAGCATGGGTGGGAATGGCCAAATCTAACATTCCCCCGCCACCTCCAAGATAA | 606 | 0.462 | MEFSQEDFDRLLLFEHTRKTAEAKYAENPLDADNLTKWGGALIELSAFQNPRDSKTMIDDAISKLEEALLLNPTKHDTLWCLGNGHTSYAFLTPDTAEAKGYFDKAHEYFQKAVDEDPGNELYTKSLEVAVKAPELHMEIHKNGLGQMNSTGFSATSKGKESKRQKSNDLKYDIFGWIILAVGIVAWVGMAKSNIPPPPPR | 201 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cca01g00089 | 201 | PANTHER | MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM20-2 | 1 | 201 | - | - | |
| Cca01g00089 | 201 | Pfam | Plant specific mitochondrial import receptor subunit TOM20 | 8 | 192 | - | - | |
| Cca01g00089 | 201 | Gene3D | Tetratricopeptide repeat domain | 1 | 152 | IPR011990 | GO:0005515 | |
| Cca01g00089 | 201 | PANTHER | MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM20-1-RELATED | 1 | 201 | IPR010547 | GO:0005742|GO:0045040 | |
| Cca01g00089 | 201 | SUPERFAMILY | TPR-like | 22 | 127 | IPR011990 | GO:0005515 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Cca01g00089 | Cca-Chr1 | 916685 | 921889 | Dispersed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cca01g00089 | - | - | gmx:100775949 | 360.147 |