Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g00086 ATGGTCGTTGCGCAGAAACTCAAAGAAGCTGAAATCACCGAGCAGGATTCACTTCTTCTCACGAGGAACCTGCTCCGAATCGCCATATTCAATATCAGTTATATCAGAGGACTATTTCCTGAGAAGTATTTCAATGATAAGTCTGTTCCCGCGTTAGAGATGAAGATAAAAAAACTTATGCCACTGGATGCTGAGTCTCGGAGACTGATTGATTGGATGGAGAAAGGTGTATACGATGCCTTACAAAAGAAATACCTAAAGACGCTTCTGTTTTGTGTGTGCGAAGCAGTGGACGGACCAATGATTGAGGAATATGCATTTTCCTTTAGCTATTCGGATTCTGAAAATCAAGAGGTTTCGATGAATATCAACCGCACGGGAAACAAAAAGCAACGGGGGACCTTCAAGTGTAACTCGACTACAGAAATTACTCCCCAGCAGATGAGGAGTTCTGCATGTAAAATGATCCGAACTCTAGTTCAGTTGATGAGAACTCTGGAGAAAATGCCAGAAGAGCGTACCATTCTAATGAAGCTCCTCTACTATGATGATGTAACGCCAGCTGATTATGAGCCTCCTTTCTTCAGGGGCTGCGCAGATGAAGAAGCGTATCATCCATGGGAGAAAAATCCATTGAAAATGGAGGTTGGGAATGTAAACAGCAAGCACTTTGTATTAGCTCTGAAGGTGAAGAGTGTGCTCGACCCTTGCGAGGATGATAATGAGGGAATCCAAGACGATATGAGTGCTGGTGATGATTCCATGCAACAGAATGAGTATTATGATACTGACAGTGAGGTTGATCTTACTCAAGGGAATCGATTCATAGTTGCTCCAATAGATAAACAGCAAGAACAGGAAGATAATGGCATGATTGATGAAGACAATACCCAGGACCCAATGGAGGATGAGCAACAGCTGGTCCGGGTAAAGGAGTGGATCAACGGTTGTCACCGTGACACTTTTGATCTTACTGACGTTCTATCAAATTTTCCAGACATCTCCGTGGTTCTAACTGAAGAGATCATGGACAAGCTTGTAGAGGAAGGTGTTCTATCAAAGATAGGGAAGGAAACCTATGGCATTAACAAGGACAAGAAATTGGAATATGAGTTCGCCGTTGTGAAAGAAGAAAACGACGGTCAAATTCCTCAAGTCTTTGACAAAGCTTTGCTGGTTGAAGATCGCATATACATGAAAGCTCTCTATCATGCTCTTCCAATGACACACGTGTCAGTCACTAAGCTTCAATGCTTGCTTGATGGAGAAGTAAACCAGTCAGCAACGCGAAAGATAATTGATAAAATGGTGCGGGATGGGTTTGTTGAACCCAAAGGCAGCAAAAGATTAGGGAAACGTGTTATCCATTCTGAGTTGACTGAAAAGAAATTCATTGAAGTCCAGAAAGCTCTTTGTGCTACTGAAGCTATGGATGTTGATCACAGTGAACCAAATAGTAACTCCAAAAAAACTGGTTTCTGTTTAAATGGAAACAACAATGATGTGTCCACATGTGGGATTCTCCATTCCATTGGTTCAGATTTAACACGTATGAAAGTGACATCGGAAACAAACTATACTGACTCCGGGAGTGGACAGAAAATGACGAAGGCAAAAGAGCCGGGGAGCACCCCTATAAGCAGGCCAGTTATATCAAGAGAGAGTTTTGCCCTAGGCAAAGAGAACGGTAGAACAAACGGAATTGCAAATCAAGGGGACGAAGCTGATACAATCATATGCAGCAGGTCTTCCCAGGACAAACGACCAAGGAAAACTAGCGCGGTCAAGGAGCCTATCCATCAAAATATGAAGCGACAGAGATCTGAGGCCCTGTGA 1836 0.4297 MVVAQKLKEAEITEQDSLLLTRNLLRIAIFNISYIRGLFPEKYFNDKSVPALEMKIKKLMPLDAESRRLIDWMEKGVYDALQKKYLKTLLFCVCEAVDGPMIEEYAFSFSYSDSENQEVSMNINRTGNKKQRGTFKCNSTTEITPQQMRSSACKMIRTLVQLMRTLEKMPEERTILMKLLYYDDVTPADYEPPFFRGCADEEAYHPWEKNPLKMEVGNVNSKHFVLALKVKSVLDPCEDDNEGIQDDMSAGDDSMQQNEYYDTDSEVDLTQGNRFIVAPIDKQQEQEDNGMIDEDNTQDPMEDEQQLVRVKEWINGCHRDTFDLTDVLSNFPDISVVLTEEIMDKLVEEGVLSKIGKETYGINKDKKLEYEFAVVKEENDGQIPQVFDKALLVEDRIYMKALYHALPMTHVSVTKLQCLLDGEVNQSATRKIIDKMVRDGFVEPKGSKRLGKRVIHSELTEKKFIEVQKALCATEAMDVDHSEPNSNSKKTGFCLNGNNNDVSTCGILHSIGSDLTRMKVTSETNYTDSGSGQKMTKAKEPGSTPISRPVISRESFALGKENGRTNGIANQGDEADTIICSRSSQDKRPRKTSAVKEPIHQNMKRQRSEAL 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g00086 611 PANTHER MEIOSIS-SPECIFIC PROTEIN ASY1 6 598 - -
Cca01g00086 611 ProSiteProfiles HORMA domain profile. 15 230 IPR003511 -
Cca01g00086 611 MobiDBLite consensus disorder prediction 522 611 - -
Cca01g00086 611 MobiDBLite consensus disorder prediction 564 579 - -
Cca01g00086 611 MobiDBLite consensus disorder prediction 580 611 - -
Cca01g00086 611 Pfam HORMA domain 17 223 IPR003511 -
Cca01g00086 611 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 6 598 - -
Cca01g00086 611 Gene3D HORMA domain 5 275 IPR036570 -
Cca01g00086 611 MobiDBLite consensus disorder prediction 522 540 - -
Cca01g00086 611 SUPERFAMILY The spindle assembly checkpoint protein mad2 11 237 IPR036570 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g00086 K12778 - gmx:100792473 1116.68