Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g00081 ATGGCGTGCAGGAGCATGCTTCGTTCATCGATTCTGGTGGAACCGTTTCGATTTCAGCCTCTTCATTTTAGTAACGGTGGCGTTAGGGCTGGTCCGTTTCGCCGTGGCAAAGGCGTAACCCTCCGTTGCTGCTCTTCTCACAGCGAGACGCCGTCGTTTCAGGACGATCAAGGTCCCCCTCAAGAAGCCGTGTTGAAGGCCATTTCCGAGGTGTCTAAAGCGGAAGGGAGGGTTGGGCAAACCACTAACATGGTTATTGGAGGGACTGTTTCGGATGATTCTACTAATGAATGGCTCACTTTGGACCAGAAGGTGAACTCATACCCTACCGATAGGGGATTCACTGCAATAGGAACTGGAGGTGAGGACTTTGTGCAAGCCATGGTTGTTGCCGTGGAATCCGTAATCCAGCAGCCAATTCCTCAGGGACGCGTGAAGCATAAGTTATCAGCAAGGGGCAAATATGTATCCGTAAACATTGGGCCTGTCCAAGTTGTTTCCAGTGAACAGGTCCAAGCTGTATATAATGCCATGAGGAGGGATGACAGGATGAAATATTTTTTGTAG 567 0.4991 MACRSMLRSSILVEPFRFQPLHFSNGGVRAGPFRRGKGVTLRCCSSHSETPSFQDDQGPPQEAVLKAISEVSKAEGRVGQTTNMVIGGTVSDDSTNEWLTLDQKVNSYPTDRGFTAIGTGGEDFVQAMVVAVESVIQQPIPQGRVKHKLSARGKYVSVNIGPVQVVSSEQVQAVYNAMRRDDRMKYFL 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g00081 188 Gene3D - 101 188 - -
Cca01g00081 188 Pfam Protein of unknown function (DUF493) 105 188 IPR007454 -
Cca01g00081 188 SUPERFAMILY YbeD/HP0495-like 102 188 IPR027471 -
Cca01g00081 188 PANTHER PHOSPHORIBOSYLFORMYLGLYCINAMIDINE SYNTHASE 1 188 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g00081 - - gmx:100795278 329.717