Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g00071 ATGGCAACCTCTGTTGTGGTTTCCACCTCTCTGTCTCTCAACTATGGCTACCGTCGCTCCCTTTCCGCTCTCTCTTGTTTGAATCCAATCTCCAAAACAAACCCTAATCAGACTTCTCATTTATGCTTCTCCAACTTGCCTCGATGGAGTTCAAAATCTGCGATTTACTGTCGCAGGGTGGTTGCTCGCACTTCAATTagagagagagagagtgagaaggagagcgagagcgaggaggagTTAGGGTTCGTGGGGGAGGACTCCGCGGCGTTTCGATTGGGGGAACAGAAGTTATCTTCGTGGATTTATTTCACCGCAATTTTGGGAGTGGTTCTCTATGTGCTCAACGTCGCCTGGATTGACAATTCAACTGGCTTCGGTAAACCCTTCGTTGACGCGGTTTCAACGCTTTCTGATTCTCACGAGGTGGTGATGTTGATCCTAATTCTCATATTTGCTGGTGTCCACAGTGGCTTAGCTAGCTTCCGGAACACTGGTGAGAAACTCATTGGAGAAAGACCTTTCCGTGTACTTTTTGCAGGGTTATCACTACCTTTGGCTGTCAGTACTATTGTGTATTTTATTAACCACAGATATGATGGACTTCAACTCTGGCAGATCCAGGATGCTCCTGGGCTTCATCAACTTCTGTGGCTTTCTAATTTCATTTCTTTCTTTTTCCTATATCCTTCAACTTTCAATCTTTTAGAGGTTGCAGCTGTTGACAAGCCTAAATTACATCTATGGGAAACTGGGATCATAAGAATAACCAGACATCCACAGATGGTTGGGCAGGTTATCTGGTGTCTTGCACATACGCTTTGGATTGGAAATTCCGTGGCTGTTGCTGCATCATTTGGCTTAATTGCACATCATTTATTTGGTGTCTGGAATGGAGACAGGCGACTGGCTATAAAATATGGGGAGAATTTTGAATTAGTTAAGAGTAGAACAAGTGTTATCCCTTTTGCAGCAATCCTTGATGGAAGACAAAAGTTACCAAAAGATTTCTACAAGGAGTTTATACGATTGCCATACTTGACAATTACTGCATTAACCTTAGGAGCTTACTTTGCACACCCGCTTATGCAAGCTGCTAGTTACAACCTTCATTGGTAG 1119 0.4173 MATSVVVSTSLSLNYGYRRSLSALSCLNPISKTNPNQTSHLCFSNLPRWSSKSAIYCRRVVARTSIRERESEKESESEEELGFVGEDSAAFRLGEQKLSSWIYFTAILGVVLYVLNVAWIDNSTGFGKPFVDAVSTLSDSHEVVMLILILIFAGVHSGLASFRNTGEKLIGERPFRVLFAGLSLPLAVSTIVYFINHRYDGLQLWQIQDAPGLHQLLWLSNFISFFFLYPSTFNLLEVAAVDKPKLHLWETGIIRITRHPQMVGQVIWCLAHTLWIGNSVAVAASFGLIAHHLFGVWNGDRRLAIKYGENFELVKSRTSVIPFAAILDGRQKLPKDFYKEFIRLPYLTITALTLGAYFAHPLMQAASYNLHW 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g00071 372 Gene3D - 136 323 - -
Cca01g00071 372 Pfam NnrU protein 144 363 IPR009915 -
Cca01g00071 372 PANTHER 15-CIS-ZETA-CAROTENE ISOMERASE, CHLOROPLASTIC 1 372 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g00071 K15744 - gmx:100793910 608.216