Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g00066 ATGGCCGCATGTGGCTGCATATCTGTCTCCAACTTCAATTGCCTCCTTGGCGCCAGAAAACTATCCAAATTCGCTTCTTCAGATGCCACACTTTCCCTATCATTCGCTGCGAGCGACTCCATGGGTCTTACTCTGCGACCCACTTCAACTCTTTCTCCTAAGAGAAACTTTTTCTCTCCCTTGCGCGTCGTTTGCGCCGATTATCCTCGCCCGGAGCTCGAAAACACCGCCAATTTCATCGAAGCTGCTTACTTATCTTCCACGTTTCGTGCTTCTCCGCGGCCACAGAAACCCTTGAAGGTCGTTATTGCCGGTGCAGGATTGGCTGGTTTATCAACTGCAAAGTATTTGGCTGATGCTGGGCATACGCCTATATTGCTGGAAGCAAGAGACGTTCTAGGTGGAAAGGTTGCTGCTTGGAAAGACAAGGATGGAGACTGGTATGAGACTGGCCTGCACATCTTCTTTGGGGCTTACCCTAATGTGCAGAACCTATTTGGTGAACTTGGCATTAATGATCGGTTACAATGGAAGGAGCATTCCATGATTTTTGCTATGCCAAATAAGCCTGGAGAGTTTAGTCGATTTGATTTTCCTGATGCCTTTCCCGCCCCATTAAATGGAATATGGGCAATATTGAGGAACAATGAGATGCTGACATGGCCAGAGAAAGTCAAATTTGCAATTGGGCTTCTGCCAGCTATGCTTGGTGGACAACCATATGTTGAGGCTCAAGATGGTCTTTCTGTTAAGGAATGGATGGCAAGACAGGGAGTACCTGAACGAGTGACTGAAGAGGTGTTCATAGCAATGTCAAAGGCACTAAACTTTATCAATCCTGATGAACTTTCAATGCAATGTATATTAATTGCTTTAAACCGATTTCTTCAGGAGAAACATGGTTCTAAAATGGCCTTTTTGGACGGCAATCCCCCTGAAAGACTTTGTATGCCAATAGTTGATCATATTCAGTCCTTGGGTGGTGAAGTTCATCTCAATTCGCGCATTCAAAAAATTGAGCTCAATAATGATGGCACCGTGAAGAGCTTCTTACTAAACAATGGGAAGGTGATGGAAGGTGATGCTTATGTGTTTGCAACTCCAGTGGATATTCTGAAGCTTCTTCTACCTGACAACTGGAAAGGGATTCCATATTTCCAGAGATTGGATAAATTAGTTGGAGTCCCAGTCATTAATGTTCACATATGGTTTGACAGAAAACTGAAGAACACATACGACCACCTTCTCTTTAGCAGAAGTCCCCTTTTGAGTGTATATGCTGACATGTCAGTAACTTGCAAGGAGTATTATAACCCAAACCAATCTATGTTAGAGTTGGTTTTTGCACCAGCCGAAGAATGGATTTCACGTAGCGATGAAGATATTATTCAAGCCACAATGTCTGAGCTTGCCAAACTCTTTCCTAATGAAATTTCCGCAGACCAGAGCAAAGCAAAGATTCTCAAGTACCACGTTGTTAAAACACCAAGGTCGGTTTACAAAACTGTTCCAAATTGTGAACCTTGTCGTCCCTTACAAAGATCTCCTATAGAGGGTTTCTATTTAGCTGGAGATTACACAAAACAAAAATATTTAGCTTCAATGGAAGGTGCCGTTCTTTCAGGGAAGTTTTGTGCACAGGCTATTGTACAGGATTCTGAGCTACTTACTGCTCGGGGCCAGAAAAGAATTGCTAAAGCGAGTGCTGTTTAA 1713 0.4343 MAACGCISVSNFNCLLGARKLSKFASSDATLSLSFAASDSMGLTLRPTSTLSPKRNFFSPLRVVCADYPRPELENTANFIEAAYLSSTFRASPRPQKPLKVVIAGAGLAGLSTAKYLADAGHTPILLEARDVLGGKVAAWKDKDGDWYETGLHIFFGAYPNVQNLFGELGINDRLQWKEHSMIFAMPNKPGEFSRFDFPDAFPAPLNGIWAILRNNEMLTWPEKVKFAIGLLPAMLGGQPYVEAQDGLSVKEWMARQGVPERVTEEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCMPIVDHIQSLGGEVHLNSRIQKIELNNDGTVKSFLLNNGKVMEGDAYVFATPVDILKLLLPDNWKGIPYFQRLDKLVGVPVINVHIWFDRKLKNTYDHLLFSRSPLLSVYADMSVTCKEYYNPNQSMLELVFAPAEEWISRSDEDIIQATMSELAKLFPNEISADQSKAKILKYHVVKTPRSVYKTVPNCEPCRPLQRSPIEGFYLAGDYTKQKYLASMEGAVLSGKFCAQAIVQDSELLTARGQKRIAKASAV 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g00066 570 SUPERFAMILY FAD/NAD(P)-binding domain 96 551 IPR036188 -
Cca01g00066 570 Gene3D - 96 559 IPR036188 -
Cca01g00066 570 Pfam Flavin containing amine oxidoreductase 108 549 IPR002937 GO:0016491
Cca01g00066 570 TIGRFAM phytoene_desat: phytoene desaturase 100 550 IPR014102 GO:0016117|GO:0016166
Cca01g00066 570 PANTHER PROTOPORPHYRINOGEN OXIDASE 52 566 - -
Cca01g00066 570 PANTHER BNACNNG70650D PROTEIN 52 566 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g00066 Cca-Chr1 691098 698635 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g00066 K02293 - gmx:100127420 1083.17