Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g00064 ATGAAGCACTTCATGCTCCCAAGAAACCCTAGCTTCAGGGAGCCCGATCTCCCTTCTTCCTCAACCCCTACTAAGCCCCGTCCCTCTCGCAAGCACAAACCCTCCAAAGAAAACGACCCTCCCTCCGATCCTAATCTTCTCGCTCCTTCCCCTTCCCCTTCCAAATTGAAGAGTCCCCTCCCTCCGAGGCCTCCCTCTTCCAACCCTCTCAAGCGCAAGCTCGCCGTCGATGCACTCTCCGATGCTTCTCTCTCCGCACCCTCCGATTCCGGCGTCAAGGTTATCGTGAGGATGAGGCCGCTGAACGCGGACAAGGACGACGGAGATCCCACTGTTCAGAAGGTTTCGCATGACTCGCTGTCGATTAATGGCCATAATTTCACCTTCGATTCCGTTGCTGACACGGCCGCTACTCAGCTGGATATTTTCGAACACGTTGGGGTGCCTCTGGTAGAGCATTGCTTGGCTGGTTTCAATAGTTCAGTTTTTGCTTATGGACAGACCGGGAGTGGGAAGACTTATACAATGTGGGGTCCTGCCAATTCTTTGTCGGAGGAAAATGATCAACAAGGGCTCGCTTCTCGTGTTTTTCAGCGGCTTTTTGCACGCCTAAATGAAGAGCAAACTAAGCATTCTGACAAGCAACTCAACTACCAGTGCCACTGCTCTTTTCTCGAGATATACAATGAGCAAATCATGGATCTGTTGGATCCGAATCAGAAAAACTTACAGATTAGAGAAGATGTCAAATCTGGTGTCTATGTCGAGAATCTTACAGAGGAGCACGTGTCTTCAATGAAGGATGTAACTCAGCTTCTAATAAAGGGATTGTCGAACAGGAGAACTGGTGCAACCAGTATAAATTCTGAGAGTTCCCGCTCACATACTGTTTTTATTTGTGTTGTTGAATCTCGATACAAGAGTCAAGCAGATGGTATGAGCAGATTTAAAACAAGTAGGATCAATCTTGTTGATCTAGCTGGGTCAGAACGACAAAAATTAACAGGTGCTGCAGGAGAGCGATTGAAGGAAGCTGGCAATATTAATAGATCACTCTCACAGCTTGGGAATTTGATAAATATTCTTGCGGAAGTCTCTCAAACAGGAAAGCAGCGGCATATACCATATAGAGATTCTAGGCTGACATTTCTGTTGCAGGACTCTCTCGGAGGAAATGCAAAATTAGCAATGATTTGTGCTATTTCACCAGCACAAAGTTGTAGGAGTGAAACATTCAGTACATTGAGATTTGCACAACGTGCCAAAGCTATCAAGAACAAGGCAGTTGTTAACGAAATTATGGAAGATGATGTGAACCACTTGCGACAAGTGATACGGCAACTAAGGGACGAGCTTCATCGAATTAAAGCAAATGGTTACAACAACCCAATGGACTCAAGTGGAGGTCATTCAGCAGCTTGGATCCGACGAAGCTTGAGTTTATTACAATCCAGCTTCAATCGACCATCACGGTTATCCCGtgttgatgatgatggtgatgcagagatggagattgacgaggaaagtgttgaggaccatgatgGAGTTTCCTGCGATGCCAATATGCCGAGTAGTTGTAATATTGTAGCCGAGAATGACAACGATATGAACACTGATGATCAGGATTTGGCTCAACACAGTGAGGAACAAAAAATTCCAAGTTGCTCTGGCAGTAAATGTTTGAATGAAGAATCATCCTGTGCAATGGTAGTACGAAACAGCTTCTCTCGTCCTGCAGATCAATCTGACACCGGAGGTTTTGCAGGTTTTTCAGCCCCAGATGTGTCCACTGATTCTCCTAGTGCTGCAATGAATTGTGTCTCGCCAGCAGGCCTCAGTATAGTTCAGTGTGATTTATCCCCAGTCCTTAAATCCCCAACTCCTAGTGTTTCTCCTAGACTCAGCACCAGCAGGAAAAGTCTGAGGACTTCGTCAGGGGTGTCTCCTTCTGAGAATGACCTTCATGTTGAAAAAGATTTGGGCACTAAAACCAGCAATCATAAACGCTCATCTTCTGCCTTTTCTAGTCAAACAGCTCCAAAATTCATTTCTAGAACAGAAAATTTAGCAGCAAGCATCCGCCATGGTCTTGAAATTATAGATGGTTACCAACGTAATGCAGCTTCGAGGCAGTCGTCATATAGGGTTTCATTACGAGCAAGAGAATCTAGACTAATTTTTCCAGCTGACAAAGTTGATGTGGGCCTGCAGACTTCTCTCGATGATAATGTTGAAGAAGATTCTGTTTTATTCACCTGTAGTAATTGTAAAAGTAGAGCGCAGCTTGATGTCAATGAGATTGACAATAACTCAAACCTACAGTTGGTACCTGTTGATTGCCTTGAGTCTGCTGATAAGCCGAAGAAGCAAGTTCTCAAAGCAGTAGAGAAGGTTTTAGCAGGATCTATAAGGAGAGAAATGGCGCTTGAAGAGTTCTGTGCCAAACAGACTTCTGAGATAATGCAGCTTCATCGCCTGGTACAACAGTACAAGCTTGAGCGAGAATGCAATGCCATAATTGCACAGACAAGGGAAGATAAAATTCTTCGCCTTGAGAGCCTTATGGATGGCGTTTTACCCACTGAAGAATTCATGGAGGAAGAGTTAGTGGCTCTTACCCACGAACACAAGCTGTTAAAGGATAAGTATGAGAATCATCCAGAAGTTTTGAAGATGGAGATAGAGTTGAAAAGAGTGCAAGATGAATTAGAAAAATATCAAAATTTCTACAAATTAGGGGAGAGAGAAGTGTTGATGGAGGAGATACAAAGTTTAAGAAGCCAGCTTCAATTTTATATCGACTCTTCATCCACTTCAGCGAGGAAGCAATATCCGTTATTGCAATTGACTTACTCATCACCTGAACCCAGTTCGGCGGCAACCCTCGCTGCCATTTCAGAGTCAACagaggagagagatgagatgaatgaaatTCCAGCATCATCCAATAACAATGCTGAAGCACAATTTGAACAAGAAAGAATTAAATGGACAGAGGCAGAAAGCAGGTGGATTTCTCTTTCAGAAGAACTGAGAGCTGAGCTTGAAGCTAGCAGGTCGCTAGCTGAAAAGAGGAAGCGGGAATTAGATGCTGAGAGGAAGTGTACTGAGGAACTTCAGGAAGCCATGCACATGGCTATAGAAGGCCATGCAAGACTTCTAGAACAATACGCAGATTTGGAAGAGAAACACATCGAATTGCTTGCAAGGCATAGACAGATCCAAGATGGAATTGAGGATGTCAAGAAAGCGGCTTCAAGAGCAGGAGTAAGAGGTGCGGAGTCTAAGTTCATAAATGCTCTTGCTGCAGAAATTTCAGCTTTAAAAGCAGGAAGAGAAAAAGAACGGCGAATCTTAAGGGATGAAAATAAAGGACTTCAGGCCCAGTTGAAGGACACTGCGGAAGCAGTGCAAGCTGCTGGTGAACTGCTTTTGCGACTGAAAGAAGCTGAAGAAGCTGTCATTACTGCACAGAAACGGGCTATGGATGCAGAACAGGAAGCTGCCAGGGCCTACAAACAAATTGATAAGTTGAAGAAGACACATGAGAAGGAGATTACCTCACTTAATGAGCTCCTTGCGGAAGCACGTTTGCCGAAGGAATCTGTACAACCGACTTATGATGACGATGTTGTCATGCCCAGTTATGACGACCCAAAGGAGCCAAACAGTGTTATTGATCAGTTTGAGCCATTTAATAATAATGCAGAGTATGGTGAGCTTGCAAAACTAGCAGAATCATCATGGTTCTCTGGTTACGACAGATGTAATATATAA 3777 0.4324 MKHFMLPRNPSFREPDLPSSSTPTKPRPSRKHKPSKENDPPSDPNLLAPSPSPSKLKSPLPPRPPSSNPLKRKLAVDALSDASLSAPSDSGVKVIVRMRPLNADKDDGDPTVQKVSHDSLSINGHNFTFDSVADTAATQLDIFEHVGVPLVEHCLAGFNSSVFAYGQTGSGKTYTMWGPANSLSEENDQQGLASRVFQRLFARLNEEQTKHSDKQLNYQCHCSFLEIYNEQIMDLLDPNQKNLQIREDVKSGVYVENLTEEHVSSMKDVTQLLIKGLSNRRTGATSINSESSRSHTVFICVVESRYKSQADGMSRFKTSRINLVDLAGSERQKLTGAAGERLKEAGNINRSLSQLGNLINILAEVSQTGKQRHIPYRDSRLTFLLQDSLGGNAKLAMICAISPAQSCRSETFSTLRFAQRAKAIKNKAVVNEIMEDDVNHLRQVIRQLRDELHRIKANGYNNPMDSSGGHSAAWIRRSLSLLQSSFNRPSRLSRVDDDGDAEMEIDEESVEDHDGVSCDANMPSSCNIVAENDNDMNTDDQDLAQHSEEQKIPSCSGSKCLNEESSCAMVVRNSFSRPADQSDTGGFAGFSAPDVSTDSPSAAMNCVSPAGLSIVQCDLSPVLKSPTPSVSPRLSTSRKSLRTSSGVSPSENDLHVEKDLGTKTSNHKRSSSAFSSQTAPKFISRTENLAASIRHGLEIIDGYQRNAASRQSSYRVSLRARESRLIFPADKVDVGLQTSLDDNVEEDSVLFTCSNCKSRAQLDVNEIDNNSNLQLVPVDCLESADKPKKQVLKAVEKVLAGSIRREMALEEFCAKQTSEIMQLHRLVQQYKLERECNAIIAQTREDKILRLESLMDGVLPTEEFMEEELVALTHEHKLLKDKYENHPEVLKMEIELKRVQDELEKYQNFYKLGEREVLMEEIQSLRSQLQFYIDSSSTSARKQYPLLQLTYSSPEPSSAATLAAISESTEERDEMNEIPASSNNNAEAQFEQERIKWTEAESRWISLSEELRAELEASRSLAEKRKRELDAERKCTEELQEAMHMAIEGHARLLEQYADLEEKHIELLARHRQIQDGIEDVKKAASRAGVRGAESKFINALAAEISALKAGREKERRILRDENKGLQAQLKDTAEAVQAAGELLLRLKEAEEAVITAQKRAMDAEQEAARAYKQIDKLKKTHEKEITSLNELLAEARLPKESVQPTYDDDVVMPSYDDPKEPNSVIDQFEPFNNNAEYGELAKLAESSWFSGYDRCNI 1258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g00064 1258 ProSiteProfiles Kinesin motor domain profile. 91 424 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca01g00064 1258 Coils Coil 889 916 - -
Cca01g00064 1258 Coils Coil 1140 1195 - -
Cca01g00064 1258 Coils Coil 1008 1032 - -
Cca01g00064 1258 MobiDBLite consensus disorder prediction 508 540 - -
Cca01g00064 1258 PRINTS Kinesin heavy chain signature 157 178 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca01g00064 1258 PRINTS Kinesin heavy chain signature 285 302 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca01g00064 1258 PRINTS Kinesin heavy chain signature 320 338 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca01g00064 1258 PRINTS Kinesin heavy chain signature 374 395 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca01g00064 1258 ProSitePatterns Kinesin motor domain signature. 319 330 IPR019821 GO:0003777|GO:0005524|GO:0007018
Cca01g00064 1258 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 92 456 IPR027417 -
Cca01g00064 1258 Coils Coil 862 882 - -
Cca01g00064 1258 PANTHER KINESIN-LIKE PROTEIN KIN-12B 551 1258 - -
Cca01g00064 1258 PANTHER KINESIN-LIKE PROTEIN KIN-12B 61 512 - -
Cca01g00064 1258 MobiDBLite consensus disorder prediction 44 68 - -
Cca01g00064 1258 MobiDBLite consensus disorder prediction 1 70 - -
Cca01g00064 1258 Gene3D Kinesin motor domain 83 458 IPR036961 -
Cca01g00064 1258 Pfam Kinesin motor domain 109 424 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca01g00064 1258 Coils Coil 1050 1070 - -
Cca01g00064 1258 PANTHER CENTROMERE PROTEIN E 61 512 - -
Cca01g00064 1258 PANTHER CENTROMERE PROTEIN E 551 1258 - -
Cca01g00064 1258 MobiDBLite consensus disorder prediction 624 679 - -
Cca01g00064 1258 Coils Coil 1116 1136 - -
Cca01g00064 1258 SMART kinesin_4 89 432 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca01g00064 1258 MobiDBLite consensus disorder prediction 520 534 - -
Cca01g00064 1258 Coils Coil 431 458 - -
Cca01g00064 1258 MobiDBLite consensus disorder prediction 624 651 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g00064 Cca-Chr1 662727 669912 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g00064 5 456 Miscellaneous Gene Families AT4G39050 34.792 3.01e-61 227
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g00064 K10400 - gmx:100785790 1986.46