Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g00054 ATGGTGCACCACCGCTTCCTCCTCATAACATACCCCATACAAGGCCACATCAACCCGGCCATCCAGTTCGCCAAGCGTCTCGCAGCCACCGGCGTCCACGTCACCTTCGTCACCAGCGTCTACCACCACAGCCGCATGCTCAAAAAACCCACCGTCCCCGGCCTCTCCTTCTCCACCTTCTCCGACGGCTACGACGACGGTTACAGAACCACCGACGACTCCCAAGTCGTCTCCTACATCTCCGAGCTGAAGCGGCGCGGCGCAGAGTGTCTCAGAAATATCATAACCGCCGCCAAAAACGATGGCCAACCTTTCACCTGCTTAGCCTACACCATCCTCCTTCCCTGGGCCGGACGGGTGGCGCGTGAGTTTCACCTCCCGGGGGCGCTGCTGTGGATTCAACCAGCCACGGTTTTCGATATCTACTATCACTACTTCCACCAATACAAGGACTACATCAGCCACCAATCGCACATAGAGTTGCCGGGCTTGCCATTTTCACTCACTTCACGTGACATTCCCTCCTTCCTGTTATCCTCCAATATCTACACTTTTGCCCTCCCAACCTTCCAAGAACAGTTTGAAGATCTCGACGGAGAAACCAACCCTATAGTTCTCGTTAACACCTTTGAGGAGTTGGAATCCGAGTCCTTGAGAGCAGTTGATAAGTTCACCATGATACCAATTGGGCCACTCATTCCCTCTGCCTTCTTGGATGGTAAAGACCCGAGTGATACTTCCTTTGGTGGTGATATCTTTGATGGCTCTAATGATTACGTTGAATGGTTGGACTCGAAGCCTGAGTTGTCTGTGGTTTATGTTTCATTTGGTACCCTTGCTGTGTTGAATAAGAGACAGACGGAGGAGCTTGCACGTGCGTTGCTGGATTCTGGGTATCCTTTCTTGTGGGTTATTAGAGAAAACAATGGAAAGGAAGAGAAGGAGAAGTTACAAGAGGTGAGCTGCAGAGAGGAGCTGGAGGTGAAGGGGAAGATAGTGAAATGGTGTTCTCAGGTGGAGGTTCTGTCTCATGGTTCATTGGGGTGTTTTGTGTCGCACTGTGGATGGAATTCGACTACGGAAAGTTTGGCTTCGGGGGTTCCTATGGTGGCGTTTCCTCAGTGGTCAGATCAAATGACTAATGCGAAGTTGGTGCAAGATGTGTGGAAGACTGGGGTGAGAGTGGATGATAAGGTGAATGAGGAAGGGGTAGTGGAAGCTGAAGAGATTAGGAAGTGTTTGGAAGTGGTCATGGGGAGTGGAGAAAAAGGACAAGAAATGAGAAGGAATGCTGAGAAATGGAAATGCTTGGCCAGAGAAGCTGTGAAGGAAGGGGGCTCTTCGGATAGGAATATGAGGACTTTTCTCGATGATGTTGCAAAACATGGACAGGAATAG 1398 0.505 MVHHRFLLITYPIQGHINPAIQFAKRLAATGVHVTFVTSVYHHSRMLKKPTVPGLSFSTFSDGYDDGYRTTDDSQVVSYISELKRRGAECLRNIITAAKNDGQPFTCLAYTILLPWAGRVAREFHLPGALLWIQPATVFDIYYHYFHQYKDYISHQSHIELPGLPFSLTSRDIPSFLLSSNIYTFALPTFQEQFEDLDGETNPIVLVNTFEELESESLRAVDKFTMIPIGPLIPSAFLDGKDPSDTSFGGDIFDGSNDYVEWLDSKPELSVVYVSFGTLAVLNKRQTEELARALLDSGYPFLWVIRENNGKEEKEKLQEVSCREELEVKGKIVKWCSQVEVLSHGSLGCFVSHCGWNSTTESLASGVPMVAFPQWSDQMTNAKLVQDVWKTGVRVDDKVNEEGVVEAEEIRKCLEVVMGSGEKGQEMRRNAEKWKCLAREAVKEGGSSDRNMRTFLDDVAKHGQE 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g00054 465 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 258 395 IPR002213 GO:0008194
Cca01g00054 465 Gene3D Glycogen Phosphorylase B; 9 452 - -
Cca01g00054 465 ProSitePatterns UDP-glycosyltransferases signature. 335 378 IPR035595 -
Cca01g00054 465 Gene3D Glycogen Phosphorylase B; 247 440 - -
Cca01g00054 465 PANTHER GLUCOSYL/GLUCURONOSYL TRANSFERASES 3 460 - -
Cca01g00054 465 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 5 463 - -
Cca01g00054 465 CDD GT1_Gtf-like 5 451 IPR002213 GO:0008194
Cca01g00054 465 PANTHER GLYCOSYLTRANSFERASE 3 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g00054 Cca-Chr1 577194 579626 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g00054 6 458 Glycosyltransferase AT4G15550 50.630 6.44e-163 467
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g00054 - - gmx:100800222 757.288