Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g00046 aTGGCGGCGGCGAACTCTGAGCAGGGCAATGCTCAGAAACTGAGTTCGGAGACGTTTCAGTTATTCTCTTCCTCCGCTTCGGGTTTCGGAATCTTCGACGATGCCGCACAACAAGTTCCTGCTACACTTCCTCCTCCGTGCGTTGAAGTCATCGCTTCTGAGGCTCCTTCATCCGTCAAACACAACGTGGACTCTGTAAATTTGGACGGAGTTACATTGTTAAAGGGGCGGGTGAATACACAACAAGTCTTTGGTTTGTCCAACTCCGATTTAGTTCCCGGGAAATATGAAGGTGGACTGAAGCTGTGGGAAGGTTCACTTGATCTAATTAAAGTCCTTTGTTCAGATATTAAAAATGGGCTTATCTCATTTAGCGGGAAGCGGGTTTTAGAGGTAGGATGTGGTCACGGCCTGCCTGGAATCTTTGCATTGCTTGAGGGTGCAGCTGCTGTACATTTTCAAGACTTTAATGCTGAGGTCCTACGTTGCCTTACCATTCCTAATTTAAATGCAAATCTTTCTGGAGAATCTCAAGCGTTATCATCCAACTCAACAATTTGTGACAAGGCAGAAGTTCGCTTTTTTGCCGGTGACTGGAGTGGAATTGATAAACTGCTGCTCCCTCATGTTAGTACAGATGCAGATCATAATCATGGTGATGGTTATGACTTCATTTTGATGGCAGAGACAGTTTACTCAATCAACAGTCTCCAAAGTCTCTATAATCTTATCAAGAAGTGCTTGCGACAACCTGATGGGGTTTTGTACATGGCAGCAAAGAAGTATTATTTTGGAGTAGGTGGTGGAACTCGGCGATTTCTCTCTGTGGTAGAAAAGGATGGTGTCATGACTAGTAGCCTGGTTGCTGTAATCACAGACGGTTCATCTAATGTCCGTGAAGTATGGAAGCTTGCATACAAGTAG 924 0.4481 MAAANSEQGNAQKLSSETFQLFSSSASGFGIFDDAAQQVPATLPPPCVEVIASEAPSSVKHNVDSVNLDGVTLLKGRVNTQQVFGLSNSDLVPGKYEGGLKLWEGSLDLIKVLCSDIKNGLISFSGKRVLEVGCGHGLPGIFALLEGAAAVHFQDFNAEVLRCLTIPNLNANLSGESQALSSNSTICDKAEVRFFAGDWSGIDKLLLPHVSTDADHNHGDGYDFILMAETVYSINSLQSLYNLIKKCLRQPDGVLYMAAKKYYFGVGGGTRRFLSVVEKDGVMTSSLVAVITDGSSNVREVWKLAYK 307
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cca01g00046 307 CDD AdoMet_MTases 128 257 - -
Cca01g00046 307 PANTHER HISTIDINE PROTEIN METHYLTRANSFERASE 1 HOMOLOG-RELATED 27 298 - -
Cca01g00046 307 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 96 260 IPR029063 -
Cca01g00046 307 Gene3D Vaccinia Virus protein VP39 78 289 IPR029063 -
Cca01g00046 307 PANTHER HEPATOCELLULAR CARCINOMA-ASSOCIATED ANTIGEN 27 298 IPR019410 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Cca01g00046 Cca-Chr1 478080 480869 Dispersed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g00046 - - gmx:100790201 548.51