Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g00045 atgaatatgaatggcatggcaatgtacatgaatattgaatatgaTCATCACTCTCAGAACCTGAAATCTGAAATGGAAAAAGAAAAACCAACCAGAACTTTCTACGACAATCACTACCtctgcttcgcctttctcttctcctttctcctctgctctttcctcctATGCTTTGACTTCGCAACCTTTCATGGCCCCAACCATGCGCTCTCATTCTCTCTCAACCCATCCACCCAAAACCCTAATCCAGATTCCTGCATTGGCCGCTATGTCTACATTCACAAACTCCCTTCCCGCTTCAACGATTATTACCTTAAAAACTGCCATGTCCTCACCATTGGCTCTGACACACCCAACATGTGTCCCTATCTTCAAAACTTGGGTTTTGGGCCTCAATTTTCAAACCAGAGTTGGTACGCCACCAACCAGTTTACGTTGGAGGTCATTTTTCACAACAGGATGAAAAAATATGAGTGCTTGACCAACGATTCTTCCTTCGCATCTGCAATTTTTGTGCCGTTTTACGCTGGTCTTGACGTCAGTCGCTTTCTTTATCATTCTAATCTCACAGAGAGGGATTCCTCTGGTCGAGATCTTCTTAAATGGCTTGCAGAAAGACCCGAATGGGGGAGAATGTGGGGGAGAGACCATTTCCTTGTTGCAGGGAGAATTGCTTGGGATTTCAGGAGACAAAGTGATAATGACTCAGATTGGGGTACCAAGTTCAGATTTTTACCCGAATCAATGAACATGTCCATGTTAGCAGTTGAAGCTGGTTCCTGGAGAAACGACTATGCAATACCCTACCCTACTTCTTTCCACCCCTCCAAGGACACACAAGTTTCATTGTGGCAGAGGAAAATCAGGCACCAGAAGCGTCCTCACTTGTTTGCTTTCACTGGTGCTCCAAGGTTTGAACGTGATGGCTCCATCAGGGGTAAGATTATAGACCAATGCAGAGCTTCGAGTTTGTGCAAATTCGTTGACTGCAGCCATGGTGCGGAAAAGTGTGACGACCCCACCAATGTCATGAAGGTGTTTGAAAGTTCTGTGTTCTGTTTGCAGCCTTGGGGTGACTCCTACACCAGAAGATCCATTTTTGATTCCATGCTGGCTGGTTGTATTCCCGTTTTCTTTAGTCCTGGCACTGCTTATTCGCAGTACAAGTGGCATTTGCCCAAGAATAGGACTAGTTACTCTGTGTATATACCTGTGAAGGATGTAAAGCAATGGAATGTGAGTTTGGAAGAGGTGTTGCTGGGGATTCCGAAGGGTGAGGTGTTTGCAATGAGAGAGGAGGTTATAAAGATAGTTCCAAATATTGTTTATGCAGATCCTAGGTATAAGTTGGGTTACTTTGAAGATGCGTTTGATTTAGCAGTGAAAGGAATACTTGAGAGGATAGAGGAGGTGAGGGAAGCAATAAGGAGCGGGAGTAATCCTAGCATTGGTTTTGCAGATGAAGACCATTATAGGTTTACATTTTCAGATAATTACACCTAA 1500 0.4167 MNMNGMAMYMNIEYDHHSQNLKSEMEKEKPTRTFYDNHYLCFAFLFSFLLCSFLLCFDFATFHGPNHALSFSLNPSTQNPNPDSCIGRYVYIHKLPSRFNDYYLKNCHVLTIGSDTPNMCPYLQNLGFGPQFSNQSWYATNQFTLEVIFHNRMKKYECLTNDSSFASAIFVPFYAGLDVSRFLYHSNLTERDSSGRDLLKWLAERPEWGRMWGRDHFLVAGRIAWDFRRQSDNDSDWGTKFRFLPESMNMSMLAVEAGSWRNDYAIPYPTSFHPSKDTQVSLWQRKIRHQKRPHLFAFTGAPRFERDGSIRGKIIDQCRASSLCKFVDCSHGAEKCDDPTNVMKVFESSVFCLQPWGDSYTRRSIFDSMLAGCIPVFFSPGTAYSQYKWHLPKNRTSYSVYIPVKDVKQWNVSLEEVLLGIPKGEVFAMREEVIKIVPNIVYADPRYKLGYFEDAFDLAVKGILERIEEVREAIRSGSNPSIGFADEDHYRFTFSDNYT 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g00045 499 PANTHER XYLOGLUCAN GALACTOSYLTRANSFERASE GT14-RELATED 35 482 - -
Cca01g00045 499 Pfam Exostosin family 85 417 IPR040911 -
Cca01g00045 499 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 35 482 IPR004263 GO:0006486|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g00045 Cca-Chr1 475256 476788 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g00045 - - ccaj:109808915 1033.48