Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g00043 ATGTCCCAACCCAGATTCAGTCCCACGATCTCCCTCTGTGTGGCACTTGTTCTGTTCCAAATCTGCAATGGACAATCATTTGTGGACCACAATGAAACCATTGTGATGACCAAAAGGGTTTGCACGAAGAGCATTGGGGAGTGCTTGATGGAGTCTGAGATGGATTCTGAGAGCAACAGAAGAGTGCTGGCAATGCAGAAAAAGTACATTAGCTATGACACACTGAAGAGAGATATGGTTCCGTGTGATAGGCCTGGAGCTTCTTACTACAATTGTCATGCAATGCGAGCAAATCCTTATAGTAGAGGCTGTGAGGTAATTACTGCATGTGCAAGAGGTCAAGCCATCAAAACTTAA 357 0.4482 MSQPRFSPTISLCVALVLFQICNGQSFVDHNETIVMTKRVCTKSIGECLMESEMDSESNRRVLAMQKKYISYDTLKRDMVPCDRPGASYYNCHAMRANPYSRGCEVITACARGQAIKT 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g00043 118 PANTHER PROTEIN RALF-LIKE 31 12 114 - -
Cca01g00043 118 Pfam Rapid ALkalinization Factor (RALF) 51 112 IPR008801 -
Cca01g00043 118 PANTHER RAPID ALKALINIZATION FACTOR-LIKE 12 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g00043 Cca-Chr1 462026 463903 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g00043 - - gmx:100787736 195.667