Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g00033 ATGGGGGCATCACATGACAACGTAATTGGTCTTATATTGGCCGTCTCTTCCAGCGTTTTCATTGGTTCTAGCTATATAGTTAAAAAATTGGGTCTTAAAAAAGCTGCCGACAATGGCAATAGAGCAGCCACGGGAGGGCATTCGTATCTGTGTGAACCCTGGTGGTGGGCTGGAATGATTACAATGATCGGTGGCGAAATAGCCAATTTTGCAGCCTATGCATTCGCTCCAGCACTCCTTGTAACACCTTTGGGAGCTTTAAGCATCATTTTTAGCTCAGTGCTAGCTCACTTCATATTGAAAGAGAAATTGCACATGTTTGGCGTGCTTGGGTGTGTTCTCTGTGTGGTCGGATCTACGACTATTGTTCTGCATGCACCGCATGAGAGAGCCATTAGCTCTGTTAAGGAAGTGTGGCATCTTGCTACAGAACCGGGTTTTATTGTCTACATGTTCATTGTTGTGGTAGTGGTTACTGTTCTTATTGTCCGTTGTGTGCGAAACCATGGACAGGGTCACATGCTGGTATACATTGGAATATGTTCTCTCACGGGCTCCATGACGGTTATGAGTGTCAAAGCAGTGGGAATCGCTTTGAAGCTTACATTTGAAGGGAGTAATCAATTCATTTACTTTCAGACCTGGTTCTTCACAATTGTTGTCGTAGGATGTTGCCTTTTGCAGATTAACTACTTGAACAAGgctttggacgcgtataacactgctgttgtgtccccagtttactacgtcatgtttacatcatttacgatcatcgccagcattatcatgtttaagGATTGGGCGACGCAGGATGCATCGCAGATTGCAACTGAGTTGTGTGGGTTTGTGACAATTTTATCAGGGACCTTCCTTCTTCACAAAACTAAGGATATGGGAACTAAACCCTCAGAGGCCACGGTTTATTCAAGTCCCCAACTTCCTAAGGATACTCGCACACATGAAACCATCCAAATTTAA 978 0.4008 MGASHDNVIGLILAVSSSVFIGSSYIVKKLGLKKAADNGNRAATGGHSYLCEPWWWAGMITMIGGEIANFAAYAFAPALLVTPLGALSIIFSSVLAHFILKEKLHMFGVLGCVLCVVGSTTIVLHAPHERAISSVKEVWHLATEPGFIVYMFIVVVVVTVLIVRCVRNHGQGHMLVYIGICSLTGSMTVMSVKAVGIALKLTFEGSNQFIYFQTWFFTIVVVGCCLLQINYLNKALDAYNTAVVSPVYYVMFTSFTIIASIIMFKDWATQDASQIATELCGFVTILSGTFLLHKTKDMGTKPSEATVYSSPQLPKDTRTHETIQI 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g00033 325 PANTHER UNCHARACTERIZED 1 308 IPR008521 GO:0015095|GO:0015693|GO:0016021
Cca01g00033 325 PANTHER MAGNESIUM TRANSPORTER NIPA1-RELATED 1 308 - -
Cca01g00033 325 SUPERFAMILY Multidrug resistance efflux transporter EmrE 53 127 - -
Cca01g00033 325 MobiDBLite consensus disorder prediction 302 325 - -
Cca01g00033 325 Pfam Magnesium transporter NIPA 6 298 IPR008521 GO:0015095|GO:0015693|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g00033 Cca-Chr1 350584 354147 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g00033 K22733 - gmx:100785617 505.753