Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g00027 ATGGGTTGGCTTATTATATTTTGTGTGTTGTTTTCACTAAGTTCAGTGTTTGCTGATGGAGGAATTCCAACCACTCTGGATGGACCCTTCAAGCCTGTGACCGTTCCTCTTGATAAGAGCTTCCGAGGAAACGCCGTGGACTTGCCAGATACAGATCCTCTCGTTCAAAGAATCGTTAAAGGGTTCCAGCCAGAACAAAtctctctctccctctcttcttctcATGACTCTGTTTGGATTTCTTGGATTACAGGGGAGTTCCAAATTGGGGACAATATAGAACCCTTAGATCCTGAAACTGTTGCTAGCATAGTTCAATATGGAAGGTTCGGAAGGAAAATGAGTCACCAAGCTACGGGTTATTCCCTCGTCTACAGTCAGCTTTATCCATTTGAAGGCCTTCAGAACTACACCTCTGGAATTATACATCACGTTCGTCTCACAGGTATAAGACTCTTGAAACCCAACACACTATATCAATATCAATGTGGAGATCCTTCTTGGTCAGCAATGAGTGATATTCATTATTTCAGGACTATGCCAGCTTCTGGCCCCAAGAGCTACCCTAGCAGAATAGCAGTGGTTGGAGACTTGGGCCTTACATACAATACCACATCCACTGTTAATCATATGACCAGTAACCATCCTGATCTTATTCTGTTGGTTGGAGATGTTAGTTACGCTAACCTGTATCTTACAAATGGTACTGGGGCAGACTGCTACTCTTGCTCATTTTCTAACACTCCCATCCATGAAACATATCAGCCTCGTTGGGATTATTGGGGAAGGTACATGCAGCCTCTGATTTCTAGTGTCCCAATAATGGTAATAGAAGGGAATCATGAGATTGAAAAACAAGCTGAAAATCGAACATTTGTTGCTTATAGTTCTCGATTTGCATTCCCATCAGAAGAGAGTGGATCATCATCCACCTTATATTATTCTTTCAATGCTGGAGGGATACATTTTATAATGCTGGGTTCCTACATATCGTATTACAAATCAGGGGACCAGTACAAGTGGTTGGAGAGAGACTTGGCTTCTGTTGACAGGGAAGTAACTCCGTGGTTGGTAGCTACATGGCATTCACCTTGGTACAGCACCTACAAGGCACATTATAGAGAAGCAGAGTGTATGAGGGTAGAGATGGAAGACTTGCTATATAAATATGGCGTTGACATTGTCTTCAATGGACATGTTCATGCGTATGAGAGATCAAACCGGGTATACAACTACACATTGGATCCTTGTGGTCCTGTTCATATCACGGTTGGTGATGGTGGCAACAGGGAAAAGATGGCAATCACACATGCTGATGAACCTGGAGAGTGTCCAGAACCATCAACTACACCAGATGACTTCATGGGAGGCTTCTGTGCCTTTAACTTTACATCGGGTCCAGCAGCAGGTAACTTCTGTTGGGACCGACAGCCTGATTATAGTGCTTTCAGAGAAACTAGCTTCGGTCATGGCATTCTAGAGATGAAAAATGAAACCCATGCACTCCAGCCCATAGGAGGGCGCTAA 1527 0.4289 MGWLIIFCVLFSLSSVFADGGIPTTLDGPFKPVTVPLDKSFRGNAVDLPDTDPLVQRIVKGFQPEQISLSLSSSHDSVWISWITGEFQIGDNIEPLDPETVASIVQYGRFGRKMSHQATGYSLVYSQLYPFEGLQNYTSGIIHHVRLTGIRLLKPNTLYQYQCGDPSWSAMSDIHYFRTMPASGPKSYPSRIAVVGDLGLTYNTTSTVNHMTSNHPDLILLVGDVSYANLYLTNGTGADCYSCSFSNTPIHETYQPRWDYWGRYMQPLISSVPIMVIEGNHEIEKQAENRTFVAYSSRFAFPSEESGSSSTLYYSFNAGGIHFIMLGSYISYYKSGDQYKWLERDLASVDREVTPWLVATWHSPWYSTYKAHYREAECMRVEMEDLLYKYGVDIVFNGHVHAYERSNRVYNYTLDPCGPVHITVGDGGNREKMAITHADEPGECPEPSTTPDDFMGGFCAFNFTSGPAAGNFCWDRQPDYSAFRETSFGHGILEMKNETHALQPIGGR 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g00027 508 PANTHER PURPLE ACID PHOSPHATASE 15 8 502 - -
Cca01g00027 508 Pfam Calcineurin-like phosphoesterase 191 403 IPR004843 GO:0016787
Cca01g00027 508 Gene3D - 186 504 IPR029052 -
Cca01g00027 508 Gene3D - 63 183 - -
Cca01g00027 508 Pfam Purple acid Phosphatase, N-terminal domain 64 179 IPR015914 GO:0003993|GO:0046872
Cca01g00027 508 PANTHER ACID PHOSPHATASE RELATED 8 502 IPR039331 GO:0003993
Cca01g00027 508 SUPERFAMILY Metallo-dependent phosphatases 191 503 IPR029052 -
Cca01g00027 508 CDD MPP_PAPs 186 502 IPR041792 -
Cca01g00027 508 Pfam Iron/zinc purple acid phosphatase-like protein C 418 501 IPR025733 -
Cca01g00027 508 SUPERFAMILY Purple acid phosphatase, N-terminal domain 42 181 IPR008963 GO:0003993|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g00027 Cca-Chr1 299589 302988 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g00027 64 428 Miscellaneous Gene Families AT1G13900 25.542 4.51e-23 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g00027 K22390 - gmx:100784006 976.081