Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g00023 ATGACTAAATTTGTGTGCGCAATTCTTCTCATCTTTGCAATGGCTTTTGTGAGTCAAGTTGCCTATGGTGGTGGCGAAGGATCGCTTACACCGTCGCAATGTCCAAGCGCATGCGATTATCGTTGTTCAAAGACTCAGTACAAGAAGGCGTGTGTTTTCTTCTGTAACTATTGTTGTTTGAAATGTTTGTGTGTCCCTTCGGGAACCTATGGTAACAAGGAAGAGTGTCCATGCTACAACAACATGAAAACCAAGAGAGGAACACCCAAGTGTCCTTGA 279 0.4373 MTKFVCAILLIFAMAFVSQVAYGGGEGSLTPSQCPSACDYRCSKTQYKKACVFFCNYCCLKCLCVPSGTYGNKEECPCYNNMKTKRGTPKCP 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g00023 92 Pfam Gibberellin regulated protein 33 92 IPR003854 -
Cca01g00023 92 PANTHER EXTENSIN, PROLINE-RICH PROTEIN 11 92 - -
Cca01g00023 92 PANTHER GIBBERELLIN-REGULATED PROTEIN 12 11 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g00023 Cca-Chr1 254291 255021 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g00023 - - gmx:102668641 177.948