Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g00007 aTGGGTGGCAAGGCGATGTTGATGTTGATGCTATGCATGTTGGGTGCTGCATCGGTGCGGGGCGAAGACCCATATGTGTATTACACATGGGACGTGTCGTACGGGACAATTGCTCCACTGGGAGTGCCCCAGCAGGGTATTCTTATCAATGGGCAATTCCCGGGACCAGAAATAAATTGCACGAGCAACAACAACATCGTGGTAAATGTGTTTAACAACCTTGACGAGCCATTGCTTATGACATGGCACGGAATTCAACAGAGGAAGAACTCATGGCAAGAAGGTACACCGGGAACAACATGCCCTATCGCTCCGGGGACAAACTACACGTACCACTTCCAGGTGAAGGACCAGATTGGAAGCTTCTTCTACTATCCTTCAATAGGATTGCACAGGGCAGCGGGTGGTTTCGGTGGCCTTAGAATATTCAGTCGTCTGTTGATTCCCGTCCCATATCCAGATCCCGAGGCTGAGTACTGGGTCTTGATGGGTGACTGGTACAGCAAGAGCCACACCATCCTCAGGAAGTTCTTGGACAGCGGTCGCTCTATTGGCAGGCCAAACGGTGTGATCATCAACGGAAAAACCGCCAAGGGCGATGGCTCTGATGAACCTTCCTACACCATGATCCCTGGCAAGACCTACAAATACAGAATCTGCAACGTTGGTCTCAAGGACGCCCTAAACATTAGAATCCAAGGCCATCCCATGAAGCTTGTCGAGTTGGAAGGCTCCCACGTTGTGCAAAACGTCTACGACTCTCTTGACGTCCACGTTGGGCAATGCTTCACCGTGCTTGTCACTGCCGACCAGCAGCCAAAGGACTATTACATGGTGGCCTCCACTCGCTTCACCAGGTACACTCTAACCGGCAAAGCCATCATCCGCTACACCAACGGCGTGGGCCCTGCCTCTCCGGAGCTCCCTCCCGCCCCCCAAGGCTGGGCCTGGTCTCTCAATCAGTTCCGCTCCTTCCGTTGGAACCTCACCGCCAGCGCTGCCAGGCCTAACCCTCAGGGCTCATACCACTATGGTCAGATCAACATCACTCGCACAATCAAGCTCACCAACTCCGTCAACAGACTCCAGGGTCTCCGTTATGCCCTCAATGGCGTCTCACATGTTGATACTGAAACTCCTCTTAAGCTGGCTGAGTACTATGGTGTTGCTGACCAGGTTTTCAAGTACAACATCATCTCTGATGAGCCCCCCGTGGATCTAAAAGCCATCGTCAACGCACCCAATGTCATCAATGCCACTTACCGTGACTACATCGAGATCATCTTCGAGAACCATGGAAAAACTGTTCAATCATACAATTTGGACGGTTACTCATTCTTTGCAGTCGCCATTGAGCCAGGCAGGTGGACCCCAGAGAAGAGGAAGAACTATAACCTTTTGGATGCCGTGAGCAGACACACCATTCAAGTGTTCCCCAAGTCTTGGGCCGCCATCATGTTGACGTTCGACAATGCTGGAATGTGGAACTTAAGATCTGAACATGCTGAGAATCGCTACTTGGGGCAACAACTCTACATCAGCGTTTTGTCCCCTGAACGTTCCCTTAGGGACGAGTACAGTCTCCCGGATACCCAACTTCTTTGCGGCATCGTCAAGGATTTGCCTAAGCCGGAGCCATACCATATGTAG 1650 0.517 MGGKAMLMLMLCMLGAASVRGEDPYVYYTWDVSYGTIAPLGVPQQGILINGQFPGPEINCTSNNNIVVNVFNNLDEPLLMTWHGIQQRKNSWQEGTPGTTCPIAPGTNYTYHFQVKDQIGSFFYYPSIGLHRAAGGFGGLRIFSRLLIPVPYPDPEAEYWVLMGDWYSKSHTILRKFLDSGRSIGRPNGVIINGKTAKGDGSDEPSYTMIPGKTYKYRICNVGLKDALNIRIQGHPMKLVELEGSHVVQNVYDSLDVHVGQCFTVLVTADQQPKDYYMVASTRFTRYTLTGKAIIRYTNGVGPASPELPPAPQGWAWSLNQFRSFRWNLTASAARPNPQGSYHYGQINITRTIKLTNSVNRLQGLRYALNGVSHVDTETPLKLAEYYGVADQVFKYNIISDEPPVDLKAIVNAPNVINATYRDYIEIIFENHGKTVQSYNLDGYSFFAVAIEPGRWTPEKRKNYNLLDAVSRHTIQVFPKSWAAIMLTFDNAGMWNLRSEHAENRYLGQQLYISVLSPERSLRDEYSLPDTQLLCGIVKDLPKPEPYHM 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g00007 549 Gene3D - 345 540 IPR008972 -
Cca01g00007 549 Pfam Multicopper oxidase 32 144 IPR011707 GO:0005507
Cca01g00007 549 Pfam Multicopper oxidase 158 299 IPR001117 -
Cca01g00007 549 CDD CuRO_2_AAO_like_1 157 297 IPR034271 -
Cca01g00007 549 Gene3D - 156 335 IPR008972 -
Cca01g00007 549 PANTHER MULTI-COPPER OXIDASE 5 540 IPR045087 -
Cca01g00007 549 PANTHER L-ASCORBATE OXIDASE-LIKE PROTEIN 5 540 - -
Cca01g00007 549 Gene3D - 16 143 IPR008972 -
Cca01g00007 549 SUPERFAMILY Cupredoxins 348 535 IPR008972 -
Cca01g00007 549 Pfam Multicopper oxidase 408 518 IPR011706 GO:0005507|GO:0016491
Cca01g00007 549 SUPERFAMILY Cupredoxins 153 336 IPR008972 -
Cca01g00007 549 SUPERFAMILY Cupredoxins 22 171 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g00007 Cca-Chr1 79616 81696 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g00007 K00423 - gmx:100812197 920.228