Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g01715 ATGGCTCTAAAAAAACCTCTCCCATCGTTCACCACCTTAACACTACTTTGCATCACAACACTCTCTCTCCTTGCATCTCTCACTTCTTCTCGTTTCATCACTCCATCACACACTTCTCTTCTTGATGTCTCTTCATCAATCCAACAAACCAATCAAATCCTTTCTTTTAACCCTAAAAATAACAATCTTCTAGAAGCTTCTAATTATAATAACCAACAACAAAAAACCCAATTCAACCCCATTTCAAATTCTTCATCTCCCTTCACTCTTCTCTTACACCCAAGAGAAACCCTTTTAAACGAACACCACAAAGACTATAAAAATCTCATCTTTTCACGACTCGCTCGTGACTCAGCCCGAGTCAACTCACTCAACACAAAACTCCAACTCGCTCTCAACAACATTAAAAAATCGGATCTTCACCCGACCCAAACGGAGCTCCAACAACTAGACCTATCCACCCCAGTTTCctccggcaccggtcaaggctccggcgagtatttcacccgactcggagtgggtcaacccgaaaaaccatactacatggttctcgacacaggaagcgacgtgaattggatccaatgtaaaccttgctccgattgttaccaacaatccgacccgatttacgacccgacaacatcctcAACTTACGGACCGTTAACGTGCGAAGCGCAACAGTGTCAAGCGTTGGAAATAAGCGCGTGTCGTAACGCTGGTTTACTCGGGTTAGGGGGTGGGGCCCTTTCATTAACTTCACAAATCAAAGCGTCGTCGTTTTCGTATTGTTTAGTGGATCGCGACTCGGCTAAATCATCGACTCTTGAATTCAACTCGGCTCGACCGAGTGACTCAGTTACCGCGCCGATGTTAAAAAATCAGAAACTCGATACTTTTTACTACGTCCAACTCACCGGAATGAGTGTCGGCGGTGAGATGGTGAACGTACCGCCGGAGATTTTCGAGACGGATCAGTCGACGGGCGGTGGAGTAATTATCGACTCGGGAACGGCTGTGACTCGGCTCCAATCTCAGGCTTATGAATCAGTACGCGACGCGTTTAAAAGATTGACTCAGAATTTGCGTTCTGCAGAAGGTGTTGCGATTTTCGACACGTGTTATGATTTATCATCGTTGAGATCTGTGCGCGTTCCAACGGTGTCGTTTCATTTTGGGAATGATAGGGTTTGGGATTTGCCGGCAAAGAATTATTTGATTCCGGTTGATTCTGACGGAACTTTCTGTTTCGCGTTTGCGCCAACTTCTTCGTCGTTATCTATTATTGGAAATGTGCAACAACAAGGGACACGTGTCAGTTTTGATATTGCTAACTCTTTAGTGGGATTCTCACCCAACAAGTGCTAG 1362 0.3877 MALKKPLPSFTTLTLLCITTLSLLASLTSSRFITPSHTSLLDVSSSIQQTNQILSFNPKNNNLLEASNYNNQQQKTQFNPISNSSSPFTLLLHPRETLLNEHHKDYKNLIFSRLARDSARVNSLNTKLQLALNNIKKSDLHPTQTELQQLDLSTPVSSGTGQGSGEYFTRLGVGQPEKPYYMVLDTGSDVNWIQCKPCSDCYQQSDPIYDPTTSSTYGPLTCEAQQCQALEISACRNAGLLGLGGGALSLTSQIKASSFSYCLVDRDSAKSSTLEFNSARPSDSVTAPMLKNQKLDTFYYVQLTGMSVGGEMVNVPPEIFETDQSTGGGVIIDSGTAVTRLQSQAYESVRDAFKRLTQNLRSAEGVAIFDTCYDLSSLRSVRVPTVSFHFGNDRVWDLPAKNYLIPVDSDGTFCFAFAPTSSSLSIIGNVQQQGTRVSFDIANSLVGFSPNKC 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g01715 453 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 182 193 IPR001969 GO:0004190|GO:0006508
Car08g01715 453 PANTHER ASPARTYL PROTEASES 238 453 IPR001461 GO:0004190|GO:0006508
Car08g01715 453 Pfam Xylanase inhibitor C-terminal 299 449 IPR032799 -
Car08g01715 453 Gene3D Acid Proteases 276 453 IPR021109 -
Car08g01715 453 Gene3D Acid Proteases 236 275 IPR021109 -
Car08g01715 453 SUPERFAMILY Acid proteases 162 453 IPR021109 -
Car08g01715 453 Pfam Xylanase inhibitor N-terminal 167 230 IPR032861 -
Car08g01715 453 Gene3D Acid Proteases 141 235 IPR021109 -
Car08g01715 453 ProSiteProfiles Peptidase family A1 domain profile. 167 449 IPR033121 -
Car08g01715 453 PANTHER PROTEIN ASPARTIC PROTEASE IN GUARD CELL 1 238 453 - -
Car08g01715 453 PANTHER ASPARTYL PROTEASES 21 237 IPR001461 GO:0004190|GO:0006508
Car08g01715 453 PANTHER PROTEIN ASPARTIC PROTEASE IN GUARD CELL 1 21 237 - -
Car08g01715 453 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 330 341 IPR001969 GO:0004190|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g01715 Car-Chr8 26976466 26977974 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g01715 144 453 Miscellaneous Gene Families AT1G77480 23.038 1.44e-14 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g01715 K22683 - gmx:100784849 625.165
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g01715 08 26976466 26977974 Car08g01715 08 26976466 26977974 ECH