Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g01689 ATGAGTATTAGAAAGAAAAGGGTATTTTCAGTTGATATTGAAGAAGCTATTGTGGACTTTTTCAACTATCTTTTGCAGGAGAAGCCAAAGATTTCATTTTTCATTCCACTTATTTTGATTGCTTGGGTTATTGAGAAATGGGTCATGTCTTTCTCTTCTTGGCTTCCTCTTGCACTTGCTGTTTGGGCAACTATACAGTATGGGAGATACCAACGCAAACTACTTGTGGAGGACTTGGATAAGAAATGGAAGCGAATCGTATTGAACGTCTCGCCCATCACACCATTGGAGCATTGTGAGTGGCTGAATAAGTTGTTGACAGAAATTTGGCCCAACTATTTTAACCCTAAGCTCTCATCAAGGTTATCGGATATAGTCGAGAAACGTTTAAAGCTACGGAAACCAAGACTTCTTGAAAGAGTTGAGCTGCAAGAGTTTTCACTAGGATCATGCCCTCCTAGCTTGGCCTTACAAGGGATGCGATGGTCAACTATTGGTGATCAGAAAGTTATGCAACTTGGATTTGATTGGGACACCAACGAAATGAGCATTTTGATGCTTGCTAAGCTTGCAAAGCCATTGATGGGAACTGCACGAATCGTGATTAACAGTCTTCATATCAAGGGTGATCTTATCTTTATACCGATTCTAGATGGAAAAGCACTTTTATATTCTTTCGTATCAGCTCCTGAGGTGAGAGTAGGAATTGCCTTTGGAAGCGGCGGGAGTCAGTCACTTCCTGCAACCGAGTGGCCCGGTGTTTCTTCTTGGCTGGAAAAGGTTTTTACCGACACCATGGTTAAAACCATGGTGGAACCTCGACGACGGTGTTTCACTTTGCCTGCTGTTGATTTAAGAAAAAAGGCTGTTGGAGGCATCATATATGTTAGAGTGATATCAGCAAACAAACTTTCTAGGAGTTGCTTCAAAGCGGCATCTAAGAGGCAACAAAATGGATCATCCAATGGTAGTTCAGAAGACCTTTTTGACGACAAGGACCTACATACATTTGTAGAGGTAGAAATCGAGGAGTTAACAAGGAGAACGGATGTCAGACTCGGTTCAACCCCTAGATGGGATGCACCATTTAATATGGTTTTGCATGATAATACAGGAACTCTTCGCTTCAATCTTTACGAGTGTATTCCCAACAATGTCAAGTGCGACTACCTAGGAAGTTGTGAAATCAAGCTGAGGCATGTTGAAGATGATTCAACAATAATGTGGGCAGTAGGACCAGACTCCGGAGTTATAGCAAAACAAGCAAAATTTTGTGGAGATGAAATTGAAATGGTTGTTCCATTTGAAGGGGCTAACTTTGGAGAGTTGAAGGTGAGCATTGTAGTTAAAGAGTGGCAATTTTCTGATGGAACACATAGCTTGAACAATTTCCGAAACAACTCTCAGCAGTCGCTTAATGGATCATCAAATCTTCAGTTAAGAACTGGGACGAAACTTAACATAACTGTTGTGGAAGGAAAGGATCTTGCTGCAAAAGAAAAATCAGGAAAATTTGATCCATACATCAAATTGCAATATGGAAAGGTAATTCAAAAAACAAAGACTGCTCATTCTCCAAATCCTGTATGGAATCAGACTATTGAGTTTGATGAGATTGGTGGCGGCGAATACTTAAAACTAAAAGTGTTTACTGAGGAACTTTTCGGAGACGAAAACATCGGTAGTGCACAAGTGAATTTGGAAGGGTTGGTTGATGGCTCAACTAGGGATGTATGGATTCCTCTTGAAAGAGTGCGTTCGGGAGAAATAAGACTCAAAATAGAAGCCGTAAAGGTGGACGAACAAGAAGGATCAAAGGCTTCAGGCTCAGGAAACGGTTGGATCGAACTTGTTCTGATTGAAGGGAGGGATCTTGTTGCCGCCGATCTTAGAGGCACAAGTGATCCATATGTGAGGGTAAACTATGGAAACTTCAAGAAAAGGACAAAGGTTATATACAAAACTCTTAACCCTCAATGGAACCAAACCCTAGAGTTCCCTGATGATGGAAGTCCTTTGATACTTTATGTCAAGGATCATAATGCATTACTACCGACATCGAGTATAGGCGAATGTGTTGTAGAATATCAAAGGCTGCCCCCAAACCAGATGGCTGATAAGTGGATACCTCTTCAAGGGGTGAAAAGAGGTGAAATTCACATCCAAATTACTAGAAAAGTTCCAGAAATGAAGAAGAGGCAAAGTATAGACTCTGAACCTTCTTTGAGTAAATTACACCAAATTCCTAGTCAGATAAAACAGATGATGATCAAGTTCAGGTCATTAATAGAAGATGGAAATCTTGAAGGACTCTCTACAATATTGTGTGAACTAGAAACTTTAGAGGACACACAAGAAGGATATGTAGCTCAGCTTGAGACCGAGCAAATGCTTCTTCTAAGCAAAATAAAGGAACTTGGTCAAGAGATTATTAATTCATCTCCTTCCATAAGCAGAAGATATTCTGAAAGTGTACACTGA 2481 0.4047 MSIRKKRVFSVDIEEAIVDFFNYLLQEKPKISFFIPLILIAWVIEKWVMSFSSWLPLALAVWATIQYGRYQRKLLVEDLDKKWKRIVLNVSPITPLEHCEWLNKLLTEIWPNYFNPKLSSRLSDIVEKRLKLRKPRLLERVELQEFSLGSCPPSLALQGMRWSTIGDQKVMQLGFDWDTNEMSILMLAKLAKPLMGTARIVINSLHIKGDLIFIPILDGKALLYSFVSAPEVRVGIAFGSGGSQSLPATEWPGVSSWLEKVFTDTMVKTMVEPRRRCFTLPAVDLRKKAVGGIIYVRVISANKLSRSCFKAASKRQQNGSSNGSSEDLFDDKDLHTFVEVEIEELTRRTDVRLGSTPRWDAPFNMVLHDNTGTLRFNLYECIPNNVKCDYLGSCEIKLRHVEDDSTIMWAVGPDSGVIAKQAKFCGDEIEMVVPFEGANFGELKVSIVVKEWQFSDGTHSLNNFRNNSQQSLNGSSNLQLRTGTKLNITVVEGKDLAAKEKSGKFDPYIKLQYGKVIQKTKTAHSPNPVWNQTIEFDEIGGGEYLKLKVFTEELFGDENIGSAQVNLEGLVDGSTRDVWIPLERVRSGEIRLKIEAVKVDEQEGSKASGSGNGWIELVLIEGRDLVAADLRGTSDPYVRVNYGNFKKRTKVIYKTLNPQWNQTLEFPDDGSPLILYVKDHNALLPTSSIGECVVEYQRLPPNQMADKWIPLQGVKRGEIHIQITRKVPEMKKRQSIDSEPSLSKLHQIPSQIKQMMIKFRSLIEDGNLEGLSTILCELETLEDTQEGYVAQLETEQMLLLSKIKELGQEIINSSPSISRRYSESVH 826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g01689 826 Coils Coil 789 809 - -
Car08g01689 826 ProSiteProfiles C2 domain profile. 586 709 IPR000008 -
Car08g01689 826 Gene3D C2 domain 291 427 IPR035892 -
Car08g01689 826 PANTHER OS01G0128800 PROTEIN 1 818 - -
Car08g01689 826 Gene3D C2 domain 601 726 IPR035892 -
Car08g01689 826 Gene3D C2 domain 468 600 IPR035892 -
Car08g01689 826 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 610 724 IPR035892 -
Car08g01689 826 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 484 597 IPR035892 -
Car08g01689 826 SMART C2_3c 293 410 IPR000008 -
Car08g01689 826 SMART C2_3c 614 708 IPR000008 -
Car08g01689 826 SMART C2_3c 485 579 IPR000008 -
Car08g01689 826 CDD C2 486 582 - -
Car08g01689 826 ProSiteProfiles Synaptotagmin-like mitochondrial lipid-binding proteins (SMP) domain profile. 95 281 IPR031468 GO:0008289
Car08g01689 826 PANTHER PLANT SYNAPTOTAGMIN 1 818 - -
Car08g01689 826 ProSiteProfiles C2 domain profile. 464 580 IPR000008 -
Car08g01689 826 CDD C2 294 405 - -
Car08g01689 826 CDD C2 615 711 - -
Car08g01689 826 Pfam C2 domain 615 711 IPR000008 -
Car08g01689 826 Pfam C2 domain 485 582 IPR000008 -
Car08g01689 826 Pfam C2 domain 293 404 IPR000008 -
Car08g01689 826 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 327 406 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g01689 Car-Chr8 26723660 26731890 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g01689 486 755 Lipid Metabolism Gene Families AT3G57880 24.458 1.18e-09 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g01689 - - gmx:100807475 1416.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g01689 08 26723660 26731890 Car08g01689 08 26723660 26731890 ECH