Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g01667 ATGGCACACAATACACCATCTGATTCTGATAATGAAATTATCACAACAAGGCCAAAACTCTTTGAACATGAAAAATCCATACATGAAATTCTTGGAGGAGGAAAAGTGGCAGATATATTATTATGGAGGAACACAAATGTATCAGCTGCAATTTTTGTTGGAGTGACAGTGATGTGGTTTCTATTTGAGATTGTTGAGTACAATTTGGTGCCTCTCATTTGTCATATTTCCATTACCATCATGCTTGTACTATACATATGGTCCATTCTTGCAGATATATTAAAATGGAAAGGACCACAAATACCAGAAATTGTTTTACAAGAGTCTTTCTTCAATGATCTTGCTTCTATCCTCTACACAAGATTTAACCAATTGTTAAAAATGCTTCTCTACATTTCATGTGGAATAGACCTACCTCTCTTTCTTCTGAACATTGGTTCACTCTATATAGTTTCAGTGATTGGAAGCTACTTCAGCTTTGTTAATCTAATATATATTGGTTTTCTCTCCATTCAAACATTGCCATTTTTGTTCGATCGATACGATGAAGAAATTAACAATTTGTTTGGAGATGTCACATTCATACTCAAGAAAAATTATAGAAAATTTGACAAGAATTATATCAAAAAAATTCCTAGAGGACCAATGAAGGCAAAAAAAAATCAATAG 669 0.3259 MAHNTPSDSDNEIITTRPKLFEHEKSIHEILGGGKVADILLWRNTNVSAAIFVGVTVMWFLFEIVEYNLVPLICHISITIMLVLYIWSILADILKWKGPQIPEIVLQESFFNDLASILYTRFNQLLKMLLYISCGIDLPLFLLNIGSLYIVSVIGSYFSFVNLIYIGFLSIQTLPFLFDRYDEEINNLFGDVTFILKKNYRKFDKNYIKKIPRGPMKAKKNQ 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g01667 222 PANTHER RETICULON-LIKE PROTEIN B9 7 220 - -
Car08g01667 222 Pfam Reticulon 36 190 IPR003388 -
Car08g01667 222 PANTHER RETICULON 7 220 IPR045064 GO:0009617
Car08g01667 222 ProSiteProfiles Reticulon domain profile. 36 222 IPR003388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g01667 Car-Chr8 26515532 26517593 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g01667 - - gmx:100809028 343.199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g01667 08 26515532 26517593 Car08g01667 08 26515532 26517593 ECH