Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g01620 ATGTCCGTTCACCTCAAACTCTCTCGCTTCAATCGTATCTATCGTCCTTCCgaacttctagaaggaaaAATAATTCTAAAAACACAATCTTCAATTTCTCACTATGGAATTCGTCTTACTATCAAAGGATCCGTCAACTTGCAGGTTCGTGGAGGATCAGCTGGGGTTGTTGAGTCATTCTATGGCGTTATTAAGCCTATTCCAATTGTGAAAAGGACCGTCGAGGTTAAATCTTCCGGAAAGATTGGTTCGGGTACAACAGAGATACCATTTTCATTGAATCTTAAACAAGATGAGAATTTAGAAAGATTTTATGAGACTTTCCATGGAGCAGATATTAGTATCCAGTATTTGTTGACTGTAGATATATCTCGCGGATACTTGCATAAATCATTATCAGCAACGACGGAGTTCATTATCGAAAGTGATAAAGGTGATCTTCTACAAAGACCGATTTCTCCCGAGATGGTTATCTTTTACATTACGCAGGACACTCAAAGACATCCTCTTCTTCCCGAATTAAAATCTGGTGGTTTTCGAGTGAGTGGAAAAATCTGCACTCAGTGTTCTTTGTCTAGTCCTATTAATGGTGAATTAACTGTCGAAGCATCAGCGATTCCAattcagtctattgacattcagttatatcgcgttgaatccattcttcacggagagaaaattgtgactgagacctCTTTGATTCTAACAACTCAGGCAACAGATGGAGACGTGTGCCGTAATTTGACTCTGCCTATCTATGTAATACTTCCTCGTCTTTTGACCTGTCCAACAATCTTTGCCGGTCCCTTTTCAATTGAGTTCAAAGTTGCAATTGTTATAAGCTTTCAGTCAGAGCTATCAAAATTGCATAAGAAGTCCGACTCGAGAACTCCGAGACTCTGGCTGGCAACGGAAACATTACCGCTCGAGTTGGTTCGGGCAATGTAA 948 0.366 MSVHLKLSRFNRIYRPSELLEGKIILKTQSSISHYGIRLTIKGSVNLQVRGGSAGVVESFYGVIKPIPIVKRTVEVKSSGKIGSGTTEIPFSLNLKQDENLERFYETFHGADISIQYLLTVDISRGYLHKSLSATTEFIIESDKGDLLQRPISPEMVIFYITQDTQRHPLLPELKSGGFRVSGKICTQCSLSSPINGELTVEASAIPIQSIDIQLYRVESILHGEKIVTETSLILTTQATDGDVCRNLTLPIYVILPRLLTCPTIFAGPFSIEFKVAIVISFQSELSKLHKKSDSRTPRLWLATETLPLELVRAM 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g01620 315 Pfam Vacuolar protein sorting-associated protein 26 11 280 IPR028934 GO:0006886
Car08g01620 315 PANTHER VACUOLAR PROTEIN SORTING 26 RELATED 3 313 IPR028934 GO:0006886
Car08g01620 315 Gene3D - 3 142 IPR014752 -
Car08g01620 315 Gene3D - 185 292 IPR014752 -
Car08g01620 315 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 26C 3 313 - -
Car08g01620 315 SUPERFAMILY E set domains 3 172 IPR014756 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g01620 K25730 - gmx:100820593 529.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g01620 08 25745835 25750742 Car08g01620 08 25745835 25750742 ECH