Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g01619 ATGGCGGATCAGACCCAAAAAGCTGAGATCTTTGAACTCAACAATGGAACCATGCAGCTCCTTGTTACCAATCTCGGTTGCACTATCATCTCCTTCTCTGTTCCTGGCAAAGATGGTGTTTTATCCGATGTTGTTCTTGGACTTGACTCTGTTGAATCTTATCAGAAAGGTCTTGCTCCTTATTTTGGCTGCATCGTCGGTCGGGTAGCGAACCGGATTAAGGGTGGAAAGTTCACACTTGATGGTGTTGAGTACTCTTTGCCTCTCAACAGACCCCCAAACAGTCTCCATGGTGGAAATGTTGGATTTGATAAGAAGGTATGGGAAGTAATTGAATATAAAAAAGGCGAAACTCCATCGATCACTTTTAAGTATGACAGTCATGATGGGGAGGAAGGTTATCCTGGAGACATCACTGTTACCGCAACTTACACGCTCACCTCAAGCACGACTCTGAGGCTCGACATGGAAGGAGTGCCAAAGAACAAGCCAACCATCATTAACTTAGCTCAACATACCTATTGGAACTTAGCCGGCCATAACTCAGGGGATATACTTGACCATTCAATTCAGATATGGGCTAACCATGTCACTCCTGTGGATCAGCATACCGTGCCGACCGGCGAAATCATGCCAGTGAAGGGTACACCTTTTGATTTCACATCTGAGAAGAGAATAGGTGACACCATTAATCAAGTTGGATTAGGATATGATCACAATTACGTACTCGATTTTGGTGAAGAGAAAGCAGGTTTGAGACACGCTGCAAAAGTAAGGGATCCGTCGAGTTCAAGGGTACTTAACTTGTGGACAAATGCTCCTGGTGTGCAATTTTACACTGCAAATTATGTCAACAATGTATCAGGAAAAGAAGGTGCTATATATGGAAAGCATGCCGGATTATGTCTTGAGACACAAGGATTCCCTGACGCTATAAACCAGTCGAATTTTCCGTCTGTCGTGGTTCGACCGGGTGAGAAGTATCAACATTCTATGTTGTTTGAGTTTTCAATTGAATGA 1020 0.4373 MADQTQKAEIFELNNGTMQLLVTNLGCTIISFSVPGKDGVLSDVVLGLDSVESYQKGLAPYFGCIVGRVANRIKGGKFTLDGVEYSLPLNRPPNSLHGGNVGFDKKVWEVIEYKKGETPSITFKYDSHDGEEGYPGDITVTATYTLTSSTTLRLDMEGVPKNKPTIINLAQHTYWNLAGHNSGDILDHSIQIWANHVTPVDQHTVPTGEIMPVKGTPFDFTSEKRIGDTINQVGLGYDHNYVLDFGEEKAGLRHAAKVRDPSSSRVLNLWTNAPGVQFYTANYVNNVSGKEGAIYGKHAGLCLETQGFPDAINQSNFPSVVVRPGEKYQHSMLFEFSIE 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g01619 339 PANTHER ALDOSE-1-EPIMERASE 7 338 - -
Car08g01619 339 PANTHER ALDOSE 1-EPIMERASE 7 338 - -
Car08g01619 339 SUPERFAMILY Galactose mutarotase-like 5 337 IPR011013 GO:0003824|GO:0005975|GO:0030246
Car08g01619 339 PIRSF GALM 1 339 IPR015443 GO:0016853|GO:0019318
Car08g01619 339 CDD galactose_mutarotase_like 14 336 - -
Car08g01619 339 Gene3D - 1 339 IPR014718 GO:0030246
Car08g01619 339 Pfam Aldose 1-epimerase 11 334 IPR008183 GO:0005975|GO:0016853
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g01619 Car-Chr8 25742082 25745156 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g01619 6 337 Miscellaneous Gene Families AT3G47800 50.602 3.75e-112 328
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g01619 K01785 - gmx:100776238 600.127
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g01619 08 25742082 25745156 Car08g01619 08 25742082 25745156 ECH