Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g01618 ATGGATGCTACAGATGAGGCTTTAATGAGTATGACGAttcggttcgatagtttgattcagttTTTGGTTTTTCTGAACACTCCTAATTATTATTGCACATTTTTTGAAATTGCGTACACACTCTACACTTATTATAAAAAAAAATATAAAAATATCCACACTCTGTACGAGCACAATTTGGACGAACACAAAATCGAAATCAGTAACCGTTTAGCAATGGAGTCAGGGAGAGTGATCGGGTTCGTTGGATTGGATGAATTAGGATTAGAGATGGCGTCTTCGCTTCTTCGCCATGGATATGCTGTTCAAGCTTTCGAGATAAGTGATCCCATCATTGAAGAACTTGTAAAGCTTGGAGGAATTAGATGTGCAAGCCCTTCAGAAGCAGGGAAAGGTGTAGCTGCTTTAGTTGTCCTTATATCTCACACGGATCAGATTAATGATCTAATTTTTGGCGATGAGGGTGCTTTGAAAGGTCTAAAACCAGATACGGTTCTTATTCTTCGTTCCACAATATTACCATCAGTTCTCCATAAACTGGAGAAAGACCTGGAAGAAATTCAGAAGATAGCCTATGTTGTTGACGCATATGCCTCTTATGGGAGGTCGGATGCTTTGAATGGAAAAGTCACTATCGTATCATCTGGAAGAACAGATGCCATTGCAAGAGTACGGCCTTTTCTTTCAGCAATGTGTGAAAAGCTGTTCAGCTTTGAGGGTGAAATTGGTGGTGGCAGTAAGGTTAAAATGGTCTCTATGATGCTGGAAGGGATTCATTTCATTGCTTCAGTGGAGGCTCTTTCTCTTGGTGCAAAAGCAGGAATTCATCCATGGATAATCTATGATATAATTTCCAATGCCGCTGGAAATTCATGGGTATTCAAGAATAATGTTCCTCTTTTGCTAAAGGGAGAGGTTAAGCATCAAATTCTTAGCACTTTGATTAAGGAATTGGAAACAATTTTGGATATGGCCAAGTCACTTACTTTTCCACTTCCACTTTTGGCGACAACTCATCAACAACTTATTCATGGGGTTTCACATGTTTGTTATGAAGATGATGATGACACAACGTTGATTAAGATTTGGGAAAAAGTTTATGGGGTGAAAATTTCAGATGCTGCAAATGCAGATGCATATAACCCTGAACAACTTGCATCTGAAGTCATTACTGCTTCTAAGAGTGGGAAGCGGGTTGGTTTTGTTGGCCTTGGAGCTATGGGATTTGGCATGGCAACTAATTTGCTCAGATCGAATTTCAGCGTTTTCGGTTATGATGTGTATGAACCAACTCGAATCCGATTTTCAGATGCTGGTGGCCTTATTGGAAATTCTCCAGCGGAAGTGAGTAAAGATGTTGATGTTCTCATAATCATGGTTGCGAATGAAGTTCAAGCAGAGAATGCTTTATATGGAGAAAATGGTGCTGTTTCAGTTCTTCCTCCGGGTGCATCTATCGTTCTCTCTTCTACAGTTTCTCCTGCATATGTGAGTCAGCTAGAGCTTAGATTGCATAATGAAGGTAAAAACTTAAAGTTGGTGGATGCCCCTGTGTCTGGTGGTGTTCAGAGGGCCTCATTGGGAACACTTACGATAATGGCTTCAGGGACTGATGATGCTCTCGAGAGTGTCGGTTATGTCTTAGAAGCCTTGAGCGAAAAGCTTTATGTTATCAAAGGGGGTTGTGGTTCTGGAAGTGGTATAAAGATGGTCAACCAACTGCTAGCTGGAGTTCATATTGCATCAGCTGCTGAGGCAATGGCATTTGCAGCAAGATTGGGTTTGAATACAAGACTATTGTTTGATTTTATTACAATCAGTGGGGGAACATCCTGGATGTTTGAAAATCGTGTTCCACACATGCTAAGCAATGATTACACACCATATTCAGCCCTTGATATCTTTGTGAAGGATATGGGAATTGTTACTCGTGAATCGTCTTCTTTAAAAGTTCCACTTCACTTATCAACTACTGCTCACCAACTGTATCTGTCAGGTTCTGCTGCTGGCTGGGGACGAAAAGATGATGCTAGTGTAGTCAAGGTTTACGAGACACTAACTGGTGTTAGAGTTGAGGGAAAACTCCAGTCTCTCAGAAAAGATGTTGTGTTGCATTCTCTTCCACCCGAGTGGCCCCAAGATCATGTTCTTGACATAAAAAAATTAAAAGAAAACAATTCAAAGATTTTGGTTGTTCTGGATGATGATCCAACTGGAACACAAACTGTTCATGATATAGAGGTATTGACGGAATGGACTGTTGATTCACTAACTGAGCAGTTTAGAAGATATCCAAAATGCTTTTTCATTTTGACAAACTCCAGGGCACTGAGTTCTGACAAGGCCACTATATTGATAAAAGAGATTTGCAGAAATCTAGATACTGCAGCAAAATCAGTTGACAACATTGATTATACAGTGGTTTTGAGGGGAGATTCAACTTTGCGCGGTCACTTTCCAGAGGAAGCAGACGCTGTTATTTCAGTTTTGGGTGACATGGATGCATGGATAATTTGTCCATTTTTCCTTCAAGGAGGCCGTTACACTATTAACGATACACATTTTGTTGCTGATTCCGAAATGCTTGTTCCTGCAGGGGACACAGAGTTTGCCAAAGACGCATCTTTTGGCTACAAATCTTCAAATCTACGTGATTGGGTAGAGGAGAAGACAAATGGTCGCATACTTGCAAGTAGTGTTGTATCTATTTCTATCCACCTTTTGAGGAAAGGAGGGCCAGATGCAGTTTGTCAGCATCTATGCAGTTTGCAGAAGGGGTCCGTATGCATAGTTAATGCAGCTAGTGAAAGAGACATGACTGTATTTGCGCTTGGAATGATCAAGGCAGAGTTGACAGGGAAACGTTTCTTGTGTCGTACTGCTGCTAGCTTTGTATCTGCCTGTATGGGAATCATCTCTAAGCCTCCGGTATTGCCGAAGGATCTAGGAATAGCTAGAGAAAGAAATGGAGGTTTGATAATTGTGGGATCTTATGTTCCAAAGACGACAAAGCAGGTTGAAGAGCTTAAATTACAGTGTGGTCATTTCTTAAGAAGCATTGAGGTTTCCGTTGAAAAACTTGCAATGAGGTCTATTGAGGAGAGGGAGGATGAAGTCAGTAAAACATCTGAATTAGCAGATGTATATCTTAAAGCTCACAAAGACACACTTATATTGACCAGCCGAAATCTCATAACTGGGAAAACTGCCTCTGAGAGTTTGGACATTAACTATAAAGTGAGTTCTGCTTTGGTGGAGATAATGAAAAGAATAACTACAAAACCTCGCTATATAATTGCAAAGGGTGGTATTACCTCTTCAGACCTTGCTACAAAAGCCCTTGGTGCAAGATGTGCCAAGATTGTTGGACAAGCACTAGCCGGAATTCCCTTGTGGCAACTAGGCCCTGAAAGTAGACATCCTGGAGTTCCTTACATTGTCTTCCCAGGTAATGTCGGTGACAGTGAAGCATTGGCAGAAGTGGTGAAGTCCTGGACTTGTCCAACGAGACTTTCATCGACGAAAGAGATTCTTAATAACGCAGAAAATGGTGGATATGCTGTTGGGGCATTTAACGTTTATAATATGGAAGGAGTTCAAGCTGTTGTTTCTGCTGCAGAGGAAGAGCTAAGTCCTGCAATATTACAGATTCATCCTGGCGCCTTGAAGCAAGGAGGAATTCCCTTGGTTGCTTGTTGCATTTCTGCTGCAGAGCGTGCCAGAGTGCCCATTACTGTTCACTTTGATCATGGAACTTCAAAGCAAGATCTTGTGGAAGCTCTTGAACTGGGATTCAGTTCTGTGATGGTGGATGGTTCAAATCTTTCTTTCGATGAAAATGCTGCATACACAAAATTTATATCATTATTGGCTCACTCAAAAGATATGTTGGTTGAAGCTGAGCTGGGAAGATTGTCAGGGACAGAAGATGACTTGACTGTCGAAGAGTATGAAGCCAAGCTAACAGATGTTGATATGGCGGAAAAATTCATTGATGAGACTGGCATAGATGCTTTGGCAGTGTGTATTGGTAATGTGCATGGAAAGTATCCTGCAAGTGGACCAAATCTCAGATTAGATTTGCTTAAGGAGCTGCATGCTTTGAGCCTGAAAAAAGGAGTTTTTCTGGTGCTTCATGGTGCGTCAGGTTTGGGCGAAGAACTTGTTAAGGAATGCATAAATCTTGGTGTTAGGAAGTTCAATGTGAACACTGAAGTAAGAAAAGCATACATGGACTCACTCATTACTCCAAAAACAGATCTAGTTCATGTTATGGCTTCTGCCAAGGAAGCCATGAAAGCTGTGAGTATTACCGCAATCTaa 4323 0.4097 MDATDEALMSMTIRFDSLIQFLVFLNTPNYYCTFFEIAYTLYTYYKKKYKNIHTLYEHNLDEHKIEISNRLAMESGRVIGFVGLDELGLEMASSLLRHGYAVQAFEISDPIIEELVKLGGIRCASPSEAGKGVAALVVLISHTDQINDLIFGDEGALKGLKPDTVLILRSTILPSVLHKLEKDLEEIQKIAYVVDAYASYGRSDALNGKVTIVSSGRTDAIARVRPFLSAMCEKLFSFEGEIGGGSKVKMVSMMLEGIHFIASVEALSLGAKAGIHPWIIYDIISNAAGNSWVFKNNVPLLLKGEVKHQILSTLIKELETILDMAKSLTFPLPLLATTHQQLIHGVSHVCYEDDDDTTLIKIWEKVYGVKISDAANADAYNPEQLASEVITASKSGKRVGFVGLGAMGFGMATNLLRSNFSVFGYDVYEPTRIRFSDAGGLIGNSPAEVSKDVDVLIIMVANEVQAENALYGENGAVSVLPPGASIVLSSTVSPAYVSQLELRLHNEGKNLKLVDAPVSGGVQRASLGTLTIMASGTDDALESVGYVLEALSEKLYVIKGGCGSGSGIKMVNQLLAGVHIASAAEAMAFAARLGLNTRLLFDFITISGGTSWMFENRVPHMLSNDYTPYSALDIFVKDMGIVTRESSSLKVPLHLSTTAHQLYLSGSAAGWGRKDDASVVKVYETLTGVRVEGKLQSLRKDVVLHSLPPEWPQDHVLDIKKLKENNSKILVVLDDDPTGTQTVHDIEVLTEWTVDSLTEQFRRYPKCFFILTNSRALSSDKATILIKEICRNLDTAAKSVDNIDYTVVLRGDSTLRGHFPEEADAVISVLGDMDAWIICPFFLQGGRYTINDTHFVADSEMLVPAGDTEFAKDASFGYKSSNLRDWVEEKTNGRILASSVVSISIHLLRKGGPDAVCQHLCSLQKGSVCIVNAASERDMTVFALGMIKAELTGKRFLCRTAASFVSACMGIISKPPVLPKDLGIARERNGGLIIVGSYVPKTTKQVEELKLQCGHFLRSIEVSVEKLAMRSIEEREDEVSKTSELADVYLKAHKDTLILTSRNLITGKTASESLDINYKVSSALVEIMKRITTKPRYIIAKGGITSSDLATKALGARCAKIVGQALAGIPLWQLGPESRHPGVPYIVFPGNVGDSEALAEVVKSWTCPTRLSSTKEILNNAENGGYAVGAFNVYNMEGVQAVVSAAEEELSPAILQIHPGALKQGGIPLVACCISAAERARVPITVHFDHGTSKQDLVEALELGFSSVMVDGSNLSFDENAAYTKFISLLAHSKDMLVEAELGRLSGTEDDLTVEEYEAKLTDVDMAEKFIDETGIDALAVCIGNVHGKYPASGPNLRLDLLKELHALSLKKGVFLVLHGASGLGEELVKECINLGVRKFNVNTEVRKAYMDSLITPKTDLVHVMASAKEAMKAVSITAI 1440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g01618 1440 SUPERFAMILY Aldolase 1173 1436 - -
Car08g01618 1440 Pfam Sugar-binding N-terminal domain 730 967 IPR010737 -
Car08g01618 1440 ProSitePatterns 3-hydroxyisobutyrate dehydrogenase signature. 401 414 IPR002204 GO:0016491
Car08g01618 1440 Pfam NAD binding domain of 6-phosphogluconate dehydrogenase 79 236 IPR006115 GO:0050661
Car08g01618 1440 Pfam NAD binding domain of 6-phosphogluconate dehydrogenase 398 556 IPR006115 GO:0050661
Car08g01618 1440 SUPERFAMILY YgbK-like 730 1162 - -
Car08g01618 1440 Gene3D Aldolase class I 1166 1440 IPR013785 -
Car08g01618 1440 PANTHER ALDOLASE-RELATED 72 355 - -
Car08g01618 1440 CDD TBP_aldolase_IIB 1174 1435 IPR000771 GO:0005975|GO:0008270|GO:0016832
Car08g01618 1440 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 241 370 IPR008927 -
Car08g01618 1440 Pfam Fructose-bisphosphate aldolase class-II 1173 1436 IPR000771 GO:0005975|GO:0008270|GO:0016832
Car08g01618 1440 Pfam NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 563 683 IPR029154 GO:0051287
Car08g01618 1440 Pfam NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 243 362 IPR029154 GO:0051287
Car08g01618 1440 Gene3D - 391 559 - -
Car08g01618 1440 Gene3D - 74 239 - -
Car08g01618 1440 Gene3D - 729 969 IPR037051 -
Car08g01618 1440 Pfam Nucleotide-binding C-terminal domain 992 1158 IPR031475 -
Car08g01618 1440 TIGRFAM cbbA: ketose-bisphosphate aldolase 1171 1434 IPR000771 GO:0005975|GO:0008270|GO:0016832
Car08g01618 1440 Gene3D - 560 692 IPR013328 GO:0016491
Car08g01618 1440 Gene3D - 240 372 IPR013328 GO:0016491
Car08g01618 1440 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 397 556 IPR036291 -
Car08g01618 1440 Gene3D - 983 1165 IPR042213 -
Car08g01618 1440 PANTHER KETOSE-BISPHOSPHATE ALDOLASE CLASS-II FAMILY PROTEIN 355 1373 - -
Car08g01618 1440 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 79 235 IPR036291 -
Car08g01618 1440 PANTHER KETOSE-BISPHOSPHATE ALDOLASE CLASS-II FAMILY PROTEIN 72 355 - -
Car08g01618 1440 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 562 690 IPR008927 -
Car08g01618 1440 PANTHER ALDOLASE-RELATED 355 1373 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g01618 - - aip:107617544 2274.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g01618 08 25690841 25711329 Car08g01618 08 25690841 25711329 ECH