Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g01600 ATGGCATCTTTAAGCATGACCCAGATGAGAACTATGAATTCTGCATCTGGGTTTTCTTTGAATTGTTCTAAGAAGGTTCATGCTCTTCCTAGTAGAATTGGGTTTAAGGTTTTTGCTTCTGAGACTTCTCAGTCTTCATCAGAGCCTGATCTTAGTGTTACTGTTAATGGTTTGCATATGCCAAATCCTTTTGTTATTGGATCAGGTCCACCTGGAACTAATTATACTGTTATGAAAAGAGCTTTTGATGAAGGTTGGGGTGCTGTGATTGCTAAAACTGTATCACTTGATGCAGCAAAAGTTATAAATGTAACTCCTCGATATGCCCGACTACGCGCTAGTGCAAATGGATCTGCAAGAGGAGAAATTATCGGGTGGGAGAACATTGAACTTATCAGTGATAGGCCACTCGAAACCATGTTGAAAGAATTTAAGCAATTAAAAGACGAGTACCCTGACAGAATTCTCATAGCTTCGATCATGGAAGAGTACAATAAAGCTGCTTGGGAGGAACTTATTGATAGAGTTGAACAAACCGGAGTTGATGCACTTGAAATAAACTTCTCGTGTCCTCATGGTATGCCGGAACGAAAAATGGGTGCTGCTGTTGGGCAGGATTGTGCTCTTCTTGAAGAAGTTTGTGGATGGATAAATGCAAAAGCTACAGTTCCTGTTTGGGCCAAGATGACACCCAACATTACCGATATTTCACAGCCAGCAAAGATTGCTCTAAGTTCAGGATGTGAAGGAGTAGCTGCTATAAATACAATCATGAGCGTCATGGGAATCAATCTCAATACATTACGTCCCGAGCCTTGTGTTGAGGGGTACTCAACTCCTGGTGGTTATTCTGCGAAGGCAGTTCATCCTATAGCGCTTGCGAAGGTCATGAGTATTGCAAAAATGATGAAGGAAGAGTTTGATGGTGATAATTATTCACTTTCTGCCATTGGTGGTGTGGAAACAGGTGGTGATGCTGCTGAGTTTATTCTTCTTGGGGCAGATACTGTTCAGGTGTGCACTGGTGTTATGATGCATGGCTATGGTCTTGTTAAGAAGCTTTGTCTTGAGCTACAAGACTTCATGAAAAAGCACAATTTCAGATCAATAGAAGATTTTAGAGGGGCCTCTCTTCAGTATTTTACTACTCACACTGACTTGGTGCAAAGGCAACAAGAAGCAATTAGGCAAAGGAAAGCCATAAAGAAAGGCTTGCAATCTGATAAAGATTGGACAGGAGATGGTTTTGTGAAAGAAAGTGAAAGCATGGTTTCTAATTAA 1281 0.4106 MASLSMTQMRTMNSASGFSLNCSKKVHALPSRIGFKVFASETSQSSSEPDLSVTVNGLHMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDAAKVINVTPRYARLRASANGSARGEIIGWENIELISDRPLETMLKEFKQLKDEYPDRILIASIMEEYNKAAWEELIDRVEQTGVDALEINFSCPHGMPERKMGAAVGQDCALLEEVCGWINAKATVPVWAKMTPNITDISQPAKIALSSGCEGVAAINTIMSVMGINLNTLRPEPCVEGYSTPGGYSAKAVHPIALAKVMSIAKMMKEEFDGDNYSLSAIGGVETGGDAAEFILLGADTVQVCTGVMMHGYGLVKKLCLELQDFMKKHNFRSIEDFRGASLQYFTTHTDLVQRQQEAIRQRKAIKKGLQSDKDWTGDGFVKESESMVSN 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g01600 426 Pfam Dihydroorotate dehydrogenase 51 362 IPR005720 GO:0005737|GO:0016627
Car08g01600 426 PANTHER BNAA01G27800D PROTEIN 11 426 - -
Car08g01600 426 SUPERFAMILY FMN-linked oxidoreductases 43 378 - -
Car08g01600 426 Gene3D Aldolase class I 51 368 IPR013785 -
Car08g01600 426 TIGRFAM pyrD_sub1_fam: dihydroorotate dehydrogenase family protein 51 376 IPR005720 GO:0005737|GO:0016627
Car08g01600 426 CDD DHPD_FMN 50 358 - -
Car08g01600 426 PANTHER DIHYDROPYRIMIDINE DEHYDROGENASE [NADP(+)] 11 426 IPR044512 GO:0006210|GO:0006212
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g01600 Car-Chr8 25492724 25497413 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g01600 K00207 - gmx:100818990 779.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g01600 08 25492724 25497413 Car08g01600 08 25492724 25497413 ECH