Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g01468 ATGATAGAAAGGATGGATGATGGAGCTCAATTTGGTAATTTCTGGATAGAGGAAATTAATGGGAAGGTTCAGACCTCTGTGAGAAAGAGAAGGAAATACAAACACAAGAAAAAGGAATACAATGGATGGGGATCAACTTCCCTTATTATTTTTCTCGAATCCATTGGTAGAGATACAAGTGACAAGATAACTCAAAGTGAGGTCACTAAAATTATAAGTGATTATGTTAACCAGAATAACCTTCTTCATCCTACGAAAAAGAAAAGAATCGTATGTGATGAGAGGCTTCATTTGTTGTTCGGAAGGAAGAGCATTAGCCGGTTGAAGATTAGTGACTTGCTTGAGTCACACTTTGTGGAGAACTGTGGAGAGTCATCTGAAGATATTATATTTGACTCAGAAGATGATGAGTATGCATCAGTGTGTGAAACCCCAAAATCAACTTCTTCGGAGAGGAAGAGTCAGCCGAGGAAACATGTTGTGGAAAAACCAAGGAGCTGTTTTGCCGCCATCAATCCTTTCAACATCAAGCTTGTTTATTTAAGAAAGAGTCTAGTTGAGGAACTTTTAAAGGACCCTGAAACTTGTGAGATGAAAGTAGTTGGAAGCTTCATAAGAATCAAGTGTGACCCAAATGACTACCTTCAGAAAAACTCACACCAGCTTCTGCAAATCACAGGTATAAAGAAGATCTCAGGAGTGGATGGGGAAATTCGCTTGCGAGCTTCAGGTTTCATTAAAGACATCAGAGTTCACATGCTTTCAGATGATGATTTCTCTGAGGAGGAGTGTGAGGATTTGCAAAGAAGAGTAAAAGATGGCTTGCTAAAGAGACCTATGATTGTGGATTTGGAGGAACAGGCTAGATTATTGCATCAGGATATGACTAAGCATTGGCTTGCAAGAGAACTTGCTCTGTTACAAAATCTGATAGACCGAGCAAATGAAAAGGGATGGCGAAGAGAGCTGGATGGATACCTACAAAAAAGGGCTAAGCTTAAGAGTCCGGAAGAACAGGAACGGTTATTGCATGAAATTCCTCGAGTTATTGCAGATGATCTAGAATCAGAATCTACGACACCAGATGCTCTAGATAAAAAAGTTGAAATCAATCACCAAGAGTTGCCGCAGACTACGACACCAGTTGTTCCGGATAAAAAAGTAGAAATCAATTTCCAACAGTTGTCACGGACTATGACACCAGTTGTTCCAGATAAAAAAGTAGAAATCAATTTCCAAGAGTTTTCACATACTACCTTTACAAAAGCATCGGTAGCGACTGAGGTGTCTAAGGAAGTTGTATTAGATTTTGCGTGCAAGCCTACAAAACGGTACGAGAAACTTCAGAGTTCAGATGAACAGGAATGGTTATTTCAAGAAACTCCTGGAGTTACTACAGATTATCTAGAATCAGTATCCAAAACACCAGAAGTTCCAGATAAAAAGGCAGAAAATAATACACAAGGGTTTTGGGAGACTACTTTTACAAAAGCATCTGTATTGACCGAGGTTCCAAAAGCGGTTTCTAATGGTTTTGCATTCAAGGCTACAAAACTGTATGTTGCCGATCTAACAAAACAAGAAAGCGAGTCACCAAAGTCAATTCTCAGTCTTAGTAGACCATCAGATGTTCCTCTTTTCAATATGGCACTAAATAGCACTGCATTGAATTGCATTTCTCATGACACTTCTGCAGTGCCCCATTGGTCTGCTATGCCTGTTCAACAGCAGCCAGTGAAACAAACTGACTCTGCATATAAGAACAATGGGGCATCTATCCCAGCGGAATCAAATGAAGCTAAGATCAAAGCAAAGATCTCTCAAAAACCATTGGACAAGCCGATACGGCCAACTCAGATTCAGGTCATAGAACTGAGCGATGACGATGACGAGGAAAATGAAAAACCAAGCACCATAAAACCGGTTCCTGCCGAGGATTTGCACTCGTCAATGTGGCATTACAGAGATCCTCAGGGACAGACTTCAAGGTTTGGAGGGCAGGCCAAAGTCAACATCAAAGTGTACTATTGGTGGATGTTCTACCCAAATATTTTCCCCGCTAATCAAGTTTTATATAAGGGTAGTATTCCAGGGTTTTCTAGTTCTACATTTTGGCGGACAACCTCTCTCTCTTTACACTACACACTCACTTCTCCAAAAACACACCGATCATTTTTCTGTGCCCTAACGCTCCTTCCACCACCTTCCTCCGCCGCCTCTCTCCTTAACCACCGAACATTCTCTTCTCAACTTCAGCGAAGTTCAAATTTTCGGAAGGATCTTTATAAGTCGCCTGTTCTAGTTCTCAAGGACTCTTTGAAACGTGAGTCTGGAGCAAAGGTTCATCATGCTAATATTCAGGCATCAAAGGCTGTTGCTGATATAATTCGTACGACCTTGGGTCCCAGGTCCATGCTTAAAATGCTTCTTGATGCTTCTGGAGGAATTGTGGTGACAAATGATGGAAATGCTATCTTACGTGAATTAGATATTGCTCACCCAGCTGCCAAGTCTATGATTGAATTAAGTCGCACCCAAGATGAAGAAGTTGGAGATGGAACTACATCAGTCATCATTCTTGCTGGTGAGATGCTCCATGTTGCTGAAGCATTCATTGAAAAAAACTATCACCCTACAGTTATTTGCCGAGCATATATCAAAGCTTTGGAGGATGCTATTGCTGTTATTGACAAAATTGCAATGCCTATTGATGCTCAGGATCGAGGAACAATGCTGGGGCTTGTAAAAAGCTGCATAGGTACCAAATTCACAAGTCAATTTGGGGATTTAATTGCTGATCTAGCTATTGATGCTACTACAACAGTAGGAGTTGATATTGGGCAAGGTTTGAGGGATGTTGATATTAAAAATTATATCAAGGTTGAGAAGGTCCCTGGTGCACAGCTCGAGGATTCGAGAGTTCTTAATGGAGTTATGATAAACAAAGATGTGGTTGCCCCTGGCAAGATGAGGAGAAAGATTGTTAACCCTCGTATCATTCTTCTTGATAGTCCTCTTGAGTATAAAAAGGGTGAAAACCAAACTAATGCTGAATTGCTTAGAGAAGAAGACTGGAGTCTCTTATTGAAGTTGGAGGAAGAATACATCGAGGAGCTCTGCATGCAGATATTGAAGTTTAAACCAGACTTGGTCATTACAGAGAAGGGTCTTAGTGATTTGGCATGCCATTATTTTAGCAAGCATGGAGTTACTGCAATCAGAAGACTGAGGAAAACTGATAATAATCGAATTGCCAAGGCATGCGGTGCTGTTATTGTGAACAGACCAGATGAGTTGCAGGAGTCTGATGTTGGTACTGGTGCAGGGTTGTTTGAAGTTAAGAAAGTTGGAGATGAGTACTTTGCTTTTATTGTTGATTGCAAAGAACCCAAAGCTTGTACTGTTTTATTACGGGGTGCTAGTAAGGATCTCTTGAATGAGGTTGAAAGAAACCTACAAGATGCCATGTCTGTTGCTAGGAACATAATAAAAAATCCAAAACTTGTTCCTGGAGGTGGTGCTACTGAGATGACTGTGTCGGCTACTTTGAAACAGAAGAGTTCTTCTATTGAAGGCATAGAGAAGTGGCCATATGAAGCTGCTGCCATTGCTTTTGAATCTATTCCACGTACTTTGGCCCAAAATTGTGGAGTAAACGTTATCCGGACAATGACTGCACTACAAGGAAAACATGCAAATGGAGAAAATGCATGGACTGGCATAGATGGAAATACTGGTGCCATCGCTGACATGCAAGAGCGCAAGATCTGGGATGCCTATAATGTGAAGGCACAAGCGTTTAAGACTGCCATTGAAGCTGCATGCATGCTTCTGAGGATTGATGATATTGTGAGTGGAATCAAGAAGAAGCAAGCCCCTGGTGCTGGCCCCTCAAAGCCTAAGATTGAGACTGAGGGAGATGCTGATGGCGACCAAATCCTTCCCGACTGA 3951 0.4131 MIERMDDGAQFGNFWIEEINGKVQTSVRKRRKYKHKKKEYNGWGSTSLIIFLESIGRDTSDKITQSEVTKIISDYVNQNNLLHPTKKKRIVCDERLHLLFGRKSISRLKISDLLESHFVENCGESSEDIIFDSEDDEYASVCETPKSTSSERKSQPRKHVVEKPRSCFAAINPFNIKLVYLRKSLVEELLKDPETCEMKVVGSFIRIKCDPNDYLQKNSHQLLQITGIKKISGVDGEIRLRASGFIKDIRVHMLSDDDFSEEECEDLQRRVKDGLLKRPMIVDLEEQARLLHQDMTKHWLARELALLQNLIDRANEKGWRRELDGYLQKRAKLKSPEEQERLLHEIPRVIADDLESESTTPDALDKKVEINHQELPQTTTPVVPDKKVEINFQQLSRTMTPVVPDKKVEINFQEFSHTTFTKASVATEVSKEVVLDFACKPTKRYEKLQSSDEQEWLFQETPGVTTDYLESVSKTPEVPDKKAENNTQGFWETTFTKASVLTEVPKAVSNGFAFKATKLYVADLTKQESESPKSILSLSRPSDVPLFNMALNSTALNCISHDTSAVPHWSAMPVQQQPVKQTDSAYKNNGASIPAESNEAKIKAKISQKPLDKPIRPTQIQVIELSDDDDEENEKPSTIKPVPAEDLHSSMWHYRDPQGQTSRFGGQAKVNIKVYYWWMFYPNIFPANQVLYKGSIPGFSSSTFWRTTSLSLHYTLTSPKTHRSFFCALTLLPPPSSAASLLNHRTFSSQLQRSSNFRKDLYKSPVLVLKDSLKRESGAKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDIAHPAAKSMIELSRTQDEEVGDGTTSVIILAGEMLHVAEAFIEKNYHPTVICRAYIKALEDAIAVIDKIAMPIDAQDRGTMLGLVKSCIGTKFTSQFGDLIADLAIDATTTVGVDIGQGLRDVDIKNYIKVEKVPGAQLEDSRVLNGVMINKDVVAPGKMRRKIVNPRIILLDSPLEYKKGENQTNAELLREEDWSLLLKLEEEYIEELCMQILKFKPDLVITEKGLSDLACHYFSKHGVTAIRRLRKTDNNRIAKACGAVIVNRPDELQESDVGTGAGLFEVKKVGDEYFAFIVDCKEPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATEMTVSATLKQKSSSIEGIEKWPYEAAAIAFESIPRTLAQNCGVNVIRTMTALQGKHANGENAWTGIDGNTGAIADMQERKIWDAYNVKAQAFKTAIEAACMLLRIDDIVSGIKKKQAPGAGPSKPKIETEGDADGDQILPD 1316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g01468 1316 SUPERFAMILY GroEL apical domain-like 971 1139 IPR027409 -
Car08g01468 1316 MobiDBLite consensus disorder prediction 1289 1316 - -
Car08g01468 1316 ProSitePatterns Chaperonins TCP-1 signature 3. 846 854 IPR002194 GO:0005524|GO:0006457|GO:0016887|GO:0051082
Car08g01468 1316 Gene3D - 173 293 IPR036128 GO:0003677
Car08g01468 1316 Gene3D SWIB/MDM2 domain 30 127 IPR036885 -
Car08g01468 1316 SUPERFAMILY Plus3-like 172 293 IPR036128 GO:0003677
Car08g01468 1316 PANTHER CHAPERONIN 764 1300 IPR017998 GO:0140662
Car08g01468 1316 SMART rtf1 170 273 IPR004343 GO:0003677
Car08g01468 1316 Pfam SWIB/MDM2 domain 60 118 IPR003121 -
Car08g01468 1316 SUPERFAMILY SWIB/MDM2 domain 32 121 IPR036885 -
Car08g01468 1316 ProSitePatterns Chaperonins TCP-1 signature 2. 818 834 IPR002194 GO:0005524|GO:0006457|GO:0016887|GO:0051082
Car08g01468 1316 Coils Coil 297 317 - -
Car08g01468 1316 CDD SWIB-MDM2_like 43 118 - -
Car08g01468 1316 PRINTS Tailless complex polypeptide 1 (chaperone) signature 1134 1156 IPR017998 GO:0140662
Car08g01468 1316 PRINTS Tailless complex polypeptide 1 (chaperone) signature 846 865 IPR017998 GO:0140662
Car08g01468 1316 PRINTS Tailless complex polypeptide 1 (chaperone) signature 1168 1180 IPR017998 GO:0140662
Car08g01468 1316 PRINTS Tailless complex polypeptide 1 (chaperone) signature 816 834 IPR017998 GO:0140662
Car08g01468 1316 PRINTS Tailless complex polypeptide 1 (chaperone) signature 794 810 IPR017998 GO:0140662
Car08g01468 1316 ProSiteProfiles Plus3 domain profile. 170 296 IPR004343 GO:0003677
Car08g01468 1316 Pfam Plus-3 domain 175 271 IPR004343 GO:0003677
Car08g01468 1316 Gene3D - 789 1284 IPR027413 -
Car08g01468 1316 SUPERFAMILY GroEL-intermediate domain like 903 1165 IPR027410 -
Car08g01468 1316 Pfam TCP-1/cpn60 chaperonin family 792 1285 IPR002423 GO:0005524
Car08g01468 1316 Gene3D GroEL 976 1130 IPR027409 -
Car08g01468 1316 PANTHER T-COMPLEX PROTEIN 1 SUBUNIT GAMMA 764 1300 - -
Car08g01468 1316 ProSitePatterns Chaperonins TCP-1 signature 1. 797 809 IPR002194 GO:0005524|GO:0006457|GO:0016887|GO:0051082
Car08g01468 1316 SUPERFAMILY GroEL equatorial domain-like 774 1286 IPR027413 -
Car08g01468 1316 CDD TCP1_gamma 765 1286 IPR012719 GO:0005524|GO:0006457|GO:0016887|GO:0051082
Car08g01468 1316 Gene3D - 902 1166 IPR027410 -
Car08g01468 1316 Coils Coil 1145 1165 - -
Car08g01468 1316 ProSiteProfiles SWIB/MDM2 domain profile. 37 120 IPR003121 -
Car08g01468 1316 TIGRFAM chap_CCT_gamma: T-complex protein 1, gamma subunit 765 1290 IPR012719 GO:0005524|GO:0006457|GO:0016887|GO:0051082
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g01468 Car-Chr8 23459231 23472949 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g01468 865 1175 Acyl Lipid Metabolism Gene Families AT4G33240 23.795 4.15e-21 99.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SWI/SNF-BAF60b Car08g01468 Cpn60_TCP1 7e-160 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g01468 K09495 - cam:101511939 1294.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g01468 08 23459231 23472949 Car08g01468 08 23459231 23472949 ECH