Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00949 ATGGCAATGAGCAACAATATAATAGGAGCAATAAATTTAGTAGCAATAGTCCTCTCAATCCCAATAATAGGTGCTGGAATATGGCTAACAAACGAACCAGCGGACACATGTGTGAAGTTTCTCCAATGGCCAGTGATAATCCTGGGAGTTCTCATATTAATAGTGTCTCTAGCTGGTTTCATTGGTTCTTTTTGGAGAGTGTCATGTCTTCTTATATTCTACCTCGTTTCAATGCTTGTGCTTATTATACTCCTTGTTTGTTTGGTGGTTTTTGTTTATATGGTAACGGTACGAGGTCATGGTAACATTGAACCTAATCGGGCTTATTTGGAATACCGTTTGGATGATTTTTCAGGGTTTCTTCGTAGAAGGGTCAGAAGTTCTTTTAAGTGGGATACTATTAGGAGTTGTCTTAGTTCAACAAATATGTGTGCTGAGTTGAATCAAAGTTACCGTATGGCTATGGATTTCTTTAACGCACGTTTAACACCAATGCAGTCAGGGTGCTGCAAGCCACCAACACAATGTGCATACACATTTGTGAACCCAACCTATTGGATTAGCCCAATAAACAATGCAGCAGATATGGATTGTCTTCAATGGAGCAACGACCAAACACAACTTTGTTACAATTGTGACTCGTGCAAGGCTGGTTTGTTGGCAAATCTTAGAAAGGAATGGAAAAGAGCTAATGTGATATTGATCATAACCGTCATTGTTTTAATTGTGGTTTATTTGGTTGGTTGCTTTGCTTTTAGGAATGCCAAGACTGAAGATCTCTTTCGCAAATACAAACAAGGCTATACTTGA 810 0.3877 MAMSNNIIGAINLVAIVLSIPIIGAGIWLTNEPADTCVKFLQWPVIILGVLILIVSLAGFIGSFWRVSCLLIFYLVSMLVLIILLVCLVVFVYMVTVRGHGNIEPNRAYLEYRLDDFSGFLRRRVRSSFKWDTIRSCLSSTNMCAELNQSYRMAMDFFNARLTPMQSGCCKPPTQCAYTFVNPTYWISPINNAADMDCLQWSNDQTQLCYNCDSCKAGLLANLRKEWKRANVILIITVIVLIVVYLVGCFAFRNAKTEDLFRKYKQGYT 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00949 269 PANTHER TETRASPANIN/PERIPHERIN-RELATED 1 268 - -
Car08g00949 269 Pfam Tetraspanin family 6 250 IPR018499 GO:0016021
Car08g00949 269 PRINTS Transmembrane four family signature 6 29 - -
Car08g00949 269 PRINTS Transmembrane four family signature 38 64 - -
Car08g00949 269 PRINTS Transmembrane four family signature 65 93 - -
Car08g00949 269 PANTHER TETRASPANIN-8-RELATED 1 268 IPR044991 GO:0009734|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00949 Car-Chr8 8717502 8719524 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g00949 1 269 Miscellaneous Gene Families AT5G46700 67.286 2.77e-130 368
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00949 - - gmx:100795775 477.633
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g00949 08 8717502 8719524 Car07g01912 07 21807199 21809454 PCT