Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00564 ATGGGAGGTCAATCCAGCAAGGGTAGTAACTCTAATTCTAATAATGATGTTCCAATACCTATTAAAATGGGTGCTCATTCTCTTTATGCGGCCGATTTAAGGTCTTATGAAGCTGCGTGTGATGAAGATCCAAACTTGCAATCGTTTGATGCTACCATTCAGGAGCGAACCAATAGGGTGATCAGCTCTCTTGCTCAAGGGATTGAGGTGCGTTCGATATCGCTTGATTCGTTAGGAGAAGTTACTGGCAGTCTTCTTGACATGAACCAGGAAGTTGTCAAAATGATTTTGGAGTGCAAGCAAGATATATGGAACAAGAAGGACCGGGACTTGTTCTCGTTGGTGGAGGATTTTTTCGAGAATAGTCTCCAGACACTGGAGTTTTGTAATGCTCTTGAGAAATGCTTGAAACGAGCGCGTGAAAAACTTGTTGTGGTTAAGTCTGTAATGACTTGTTTCGAAGAAGAGGTTCAAAATGGGGTTGAAGGGTCGACTTATGTTAAGACATTGAAAGGGCTTAAGGATTTCAAGGAAACTGGGGACCCTTTTAGTGAAGAGTTTTATTCTTTGTTTCAGTCGGTTTATGCTCAACAAGCATCAATGCTGAAGAAATTACTGATTAGAAAGCAAAAGCTTGATAAGAAATTGAAATCTCTCAAGACACTTAAGAGGGTGTCAAGTGCTATTTTTGTAGCTGCTTTTGTCGCTGTGTTGATTTTCTCAGTGGTGGCAGCTGCAATCGCTGCACCCCCAGTTATAATGGCTTTGGCTGGGGCGTTGGCTGTTCCAATAGGCTCGGTTGGAAAATGGTGTAACTCACTTTTTAAGAAATATGAAACAGCTATAAAGGGCCAAGGAGAAGTAATCAGTTCAATGCAGATTGGTACTTATATTTCATTGGTGGACATGAATAACATTCGGGTCCGTATCGAACAATTGGAAATAAAGATTGAGTCCATGTTGCAAATTGCTGATTTTGCTCTTGGAAATGAGGATGCCGTTAAGCTTGCAATCGATGAGATTAAGAAGAAAATAGAAATTTTTGCAGAGATTATTGAGACTTTGAGTGTGCAAGCTGATCAATGTAGTCGGCAGACTAGGAAAGCAAGGACAGTAGTTGTACAGAAGATAATTAAATACTCTAGTTAA 1149 0.403 MGGQSSKGSNSNSNNDVPIPIKMGAHSLYAADLRSYEAACDEDPNLQSFDATIQERTNRVISSLAQGIEVRSISLDSLGEVTGSLLDMNQEVVKMILECKQDIWNKKDRDLFSLVEDFFENSLQTLEFCNALEKCLKRAREKLVVVKSVMTCFEEEVQNGVEGSTYVKTLKGLKDFKETGDPFSEEFYSLFQSVYAQQASMLKKLLIRKQKLDKKLKSLKTLKRVSSAIFVAAFVAVLIFSVVAAAIAAPPVIMALAGALAVPIGSVGKWCNSLFKKYETAIKGQGEVISSMQIGTYISLVDMNNIRVRIEQLEIKIESMLQIADFALGNEDAVKLAIDEIKKKIEIFAEIIETLSVQADQCSRQTRKARTVVVQKIIKYSS 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00564 382 PANTHER UPF0496 PLANT-LIKE PROTEIN 1 380 - -
Car08g00564 382 Coils Coil 202 222 - -
Car08g00564 382 PANTHER UPF0496 PROTEIN 3-RELATED 1 380 IPR007749 -
Car08g00564 382 Coils Coil 303 323 - -
Car08g00564 382 Pfam Protein of unknown function (DUF677) 46 377 IPR007749 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00564 Car-Chr8 4774231 4776591 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00564 - - gmx:100819451 523.087
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g00564 08 4774231 4776591 Car08g00564 08 4774231 4776591 ECH
Car06g03753 06 69132884 69134005 Car08g00564 08 4774231 4776591 ECH