Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00549 ATGGGACTTGAAAAGGATGAAGAAAATAAAATGTTGGGTCTTAGATTTACTCCAAGGCACAAGCGTTCAAACAGTCTTCCTGATAAGAAAGGAGTTGAGGAGAATAATCCAGATGATGAAGTTGAGGCCTCAGACAGATTGAATATGGATATGGGCTACGTCACTGAATGTGCTAAAGCAAGGAATAAACAAACACCTTCAAGTGAAGTCCATAGTGCTATGAAGCAAGAGATTCTACAACTAGAGAGAAGATTACAAGACCAGTTTGAGGTTAGATGCACATTAGAAAAGGCACTTGGATACAAATCTTCATCACTTGTCCATTCAAATGGAAAGATGATTCCCAAGTCAGCCACAGAATTAATTAAGGAAATTGCAGTGTTAGAGTTAGAAGTTGTGTATTTAGAACAACATCTTCTATCTTTGTACCGAAAAGCTTTCGATCAACAATTATCATCAGCATCTCCATCTACCAAGGAAGAAACTGTAAAACATCCTGCAACAACACCTCAAGTACCATTTGTCAAGCCTTCTATGCCTGAAGCCTTAACCAGAAACCAATGTTCTACACTACAATATAATGATCATGAGCTTGAGACTCTACCAAAGGAACATTGTAGATATGAAGTTCAGACTTCGGCGAAAGAAAAGCACTTAGATGCTGGTGTTTATCGATGTCATTCCTCGTTATCTCAGTGTGCAGCATTTACAAGAACATCTCCTCCAGATGAATCTTTAACCAAATCTCTACGTGCCTGTCATTCGCAACCGTTGTCCATGATGGAGTATGTTCAAAGCTCTTCATCAAATATAATCAGTCTTGCTGAACATCTCGGTACCCGAATATCCGATCATGTCCCAGTAGCACCTAATAAACTTTCTGAAGACATGGTAAAATGCATATCAGCTATATACTGCAAACTTGCAGACCCTCCTATGATACATCCTGGCCTTTCATCTCCGAGTTCATCGTTATCGTCAATGAGTGCCTTTTCTGTTGGAGATCAAGGTGATATGTGGAGTCCAATGTTCAAGAATAATTCCTCTTTTGATGTAAGGTTAGACAATCCATTCCATGTTGAATGTCTCAAGGAGTTTAGTGGGCCATACAGCACCATGGTTGAAGTATCATGGATTTATAAAGAGAATCAGAAATCAGGTGATACAAAAAAGTTGCTCCAAAATTACAGATCACTTATTTCTCAATTAGAAGAAGTAGATCCTGGGAAGTTGGAACATGAGGAGAAGCTAGCTTTCTGGATCAACATACACAATGCTTTGGTGATGCATGCATTTTTGGCTTATGGCATTCCACAAAACACTATGAAAAGAGTCTTTCTTCTTTTGAAGGCTGCATATAATGTTGGTGGTTACACAATTAGTGCAGACACAATGCAAAATACTATACTTAAGTGTCGAATGTCTCGCCCCGGACAGTGGCTACGTTTGTTGTTTTCTTCGAAGACAAAATTCAGAACAGGTGATGGACGACAAGCATATGCATTAGAACATCCTGAGCCTCTTTCTCACTTTGCTCTCTGTTCAGGAAACCATTCGGATCCTGCGGTACGTGTATATACACCAAAGAGAGTGTTTGAAGATTTAGAAGTGGCAAAAGACGAGTACATTCGAGCTACATTAGGTGTACGCAAGGACCAAAAAGTACTTCTACCAAAGCTTGTTGAATCATTCAGCAAGGACTCTGATTTGTGTCCTAGTGGTGTTATGGAGATGATCCTAGAGTCTCTACCTGAATCACTAAGGAAAAGAGTTAAGAAATGTCAAGTTGCAAAATCAAAGAAGTGCATAGAATGGATTCCACATAACTTTAATTTTAGATATCTGATATCTAAGGATGTGTTAAAATGA 1869 0.3895 MGLEKDEENKMLGLRFTPRHKRSNSLPDKKGVEENNPDDEVEASDRLNMDMGYVTECAKARNKQTPSSEVHSAMKQEILQLERRLQDQFEVRCTLEKALGYKSSSLVHSNGKMIPKSATELIKEIAVLELEVVYLEQHLLSLYRKAFDQQLSSASPSTKEETVKHPATTPQVPFVKPSMPEALTRNQCSTLQYNDHELETLPKEHCRYEVQTSAKEKHLDAGVYRCHSSLSQCAAFTRTSPPDESLTKSLRACHSQPLSMMEYVQSSSSNIISLAEHLGTRISDHVPVAPNKLSEDMVKCISAIYCKLADPPMIHPGLSSPSSSLSSMSAFSVGDQGDMWSPMFKNNSSFDVRLDNPFHVECLKEFSGPYSTMVEVSWIYKENQKSGDTKKLLQNYRSLISQLEEVDPGKLEHEEKLAFWINIHNALVMHAFLAYGIPQNTMKRVFLLLKAAYNVGGYTISADTMQNTILKCRMSRPGQWLRLLFSSKTKFRTGDGRQAYALEHPEPLSHFALCSGNHSDPAVRVYTPKRVFEDLEVAKDEYIRATLGVRKDQKVLLPKLVESFSKDSDLCPSGVMEMILESLPESLRKRVKKCQVAKSKKCIEWIPHNFNFRYLISKDVLK 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00549 622 MobiDBLite consensus disorder prediction 1 46 - -
Car08g00549 622 PANTHER UNCHARACTERIZED 8 622 - -
Car08g00549 622 Pfam Leucine-zipper of ternary complex factor MIP1 68 149 IPR025757 -
Car08g00549 622 Pfam Protein of unknown function, DUF547 410 543 IPR006869 -
Car08g00549 622 PANTHER TRANSPORTER, PUTATIVE-RELATED 8 622 - -
Car08g00549 622 MobiDBLite consensus disorder prediction 1 47 - -
Car08g00549 622 MobiDBLite consensus disorder prediction 154 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00549 Car-Chr8 4590503 4595455 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00549 - - gmx:100813952 1001.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g00549 08 4590503 4595455 Car08g00549 08 4590503 4595455 ECH
Car08g00549 08 4590503 4595455 Car07g01501 07 14595542 14600321 PCT