Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00546 ATGGGGAATTGCACCTCCTCCGATTCAACTCGTGTTGCAACAGCCAAACTCGTTTTACAAGACGGAAGGTTACAAGAGTTTTCGTATCCTGTTAAAGTTTCTTACCTATTGCTAGAACATCCTTCGTGCTTTATTTGTAACTCCGACGAAATGGATTTCGACGACGTCGTTACCGCCGTCGACGAACACCAAGTGTTGCAACCAGGGCAGCTTTATTTTGCTCTTCCGTTGAGTTGGTTGAGGCAACCGTTACAGCCTCAAGAAATGGCTGCATTGGCCGTTAAAGCTAGTTCCGCTCTTATGAAAAGCTCCGCCGCCAATAAATGTGGTTCCCGCCGGAAACAGATTCTGTTCTCCGGTGAGTTTGACTCTAAACGTGTTGCTCCGGCTAACGTAGCTTCCGGTGGTACTGTACATAGATCGAGAAGAGGAAGAACCACCGCCGCCGGCGGTGGTGCTGGTTTAGGGAAGTTTGCAGCATTATTGAGTTCGATACCTGAGTAG 504 0.4841 MGNCTSSDSTRVATAKLVLQDGRLQEFSYPVKVSYLLLEHPSCFICNSDEMDFDDVVTAVDEHQVLQPGQLYFALPLSWLRQPLQPQEMAALAVKASSALMKSSAANKCGSRRKQILFSGEFDSKRVAPANVASGGTVHRSRRGRTTAAGGGAGLGKFAALLSSIPE 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00546 167 PANTHER HTH-TYPE TRANSCRIPTIONAL REGULATOR 1 166 - -
Car08g00546 167 PANTHER DUF4228 DOMAIN PROTEIN-RELATED 1 166 - -
Car08g00546 167 Pfam PADRE domain 1 167 IPR025322 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00546 Car-Chr8 4576553 4577351 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00546 - - gmx:100787837 213.386
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g00546 08 4576553 4577351 Car08g00546 08 4576553 4577351 ECH
Car08g00546 08 4576553 4577351 Car07g01499 07 14569653 14570434 PCT