Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00536 ATGTCGCCGGCGCCGGAATATTCCTTCGCCGTCGAATACGACGGACCTCCGATTTCTTACGATCTTCCCCGAGCACTCCCCATAACTGTCGACAACATTCCGGTGGCTTCAGTTGTTTCTCAGGTTCCTCTCTCCGACACGCTCTCTTTACCAGTTGTTCAGCCTCTCTTACCACCGCACCACCACACCGTAAAAGAGCTGAAAACACTAAGCTCCGAATCTAGGGTTTCCAAAGAACTCGAATTAGCTTCTGAAAGAACAGTTTCTCCCACTTCCGTTATTGCCTTCGATCACCGAGCTTCGCAGATTAACGTATGTGAGCTCTCCGGCGAATTAAGCAGTTCCGGACCGTTTGATTTATCGAACGGCAATGACGGTTCCGGCGAGTGCGAGTTTTCCGATGTTTGTGATTCTTCGAGGTTGCTTGAAGAATCAAGCTCTAGTGAGTTACGAGGTGGAGTTTGTAGAAGCACTAGAAGCTTTAACACTATGGAGTTTAATGCTTTGGGTGTTTCAAATGATGATGAAAAAGAAAGTTTTGATTTTAACGAGTTAAATTTAAACCAACAAGATTGGTGTTCAACTGAGTCAGTGTTGAGTTTAGAGTATCCATCAACTCGTGTTTCTTCATTGAAAGCTGAGGATTGTGATGGTAGAAGGGTTCCTGCTGTTTCTTTTAACGTGGACTatgatgatgatgatgatggtgatttgaatgaggagtttgatgttgaggaAACTGTGACTAGACCTGTTAGAAGGGAGCCTCTAACAAAGGGAAAGAAAGGATCTTGTTATAGATGTTTTAAGGGGAATAGGTTCACTGATAAGGAGGTTTGTTTGGTTTGTGATGCAAAGTATTGTAGTAATTGTGTGCTTAGAGCAATGGGGTCTATGCCCGAAGGTCGAAAATGTGTTACTTGTATTGGATTTCCTATTGAAGAGTCAAAAAGAGGGAATTTAGGGAAATGCTCTCGGATGCTTAAGCGATTGCTTAATCAGTTGGAGGTTAGACAGATAATGAAAGCTGAGAGATTTTGTGAAGCAAATCAGCTTCCACCTGATTACATTTCTGTGAATGGGAAGCCACTTTCTTATGAGGAATTGATTACCTTGCAGAACTGTACAAACCCTCCAAAGAAGCTTAAGCCAGGAAACTATTGGTATGATAAAGTATCCGGATTTTGGGGGAAGGAAGGACAGAAGCCTTCCAGTATTATAAGTCCCCATCTAAATGTTGGAGGTCCCATCCAGCCAGATGCTAGCAATGGAAACACACAGGTTTTCGTTAATGGTCGGGAAATAACAAAAGTAGAGCTTCGGATGTTGCAGTTGGCTGGAGTTCAGTGTGCCGGTAACCCACATTTTTGGGTCAATGAGGATGGTTCCTATCAAGAAGAGGGACAGAAGAACACACGAGGATATATATGGGGAAAGGCTGGAACCAAGCTTGTATGTGCATTCCTGTCCCTGCCAGTTCCTTCCAAATCTTCCAATTCTATTGGAGAACAACACTCCAATATGGCTAGCAGATCAATTCCTGATTACCTCGAGCACGGAATAGTTCAAAAGCTTCTCTTGGTTGGTTGCAGTGGATCTGGAACGAGCACTATTTTTAAGCAGGCCAAGATTCTTTACAAAAGCATCCCCTTCTCAGAAGATGAACATGAAAATATAATATTGACCATTCAGAGCAATGTTTATACCTACCTTGGCATACTCCTTGAGGGCCGCGAGCGTTTTGAGGATGAAATATTGGCAGATTTAAAGAAAAGTCAATCTTGCGTGCTTGATACAACAGGAACCAGTCCAAAACCTGATGATAAAACAATATATTCCATTGGCCCTAGGCTGAAAGCATTCTCTGATTGGTTGCTGAAAACTATGGCATCGGGCAAACTGGACGCTATCTTTCCTGCAGCTACTCGTGAATATGCACCATTGATTGAGGAATTGTGGAATGATGCTGCCATTAAGGCCACATACGAAAGAAGAAGTGAATTGGAAATGCTGCCTAGTGTTGCCAGTTATTTCTTAGAACGGGCTGTCAAAATACTAAGGACAGATTATGAACCCTCGGATTTAGATATCCTCTATGCTGAAGGAGTTACTTCATCAAATGGGTTGGCTTGTGTGGAGTTTTCATTTCCCCAAGCAGCTTCCGAGGAAACTATGGACACTACTGATCAACATGATTCTTTGGCTAGTAGGTATCAACTAATTAGAGTGCATGCAAGGGGGCTAGGAGAAAATTGCAAGTGGCTAGAGATGTTTGAGGATGTTGAAATGGTCATCTTCTGTGTTTCCTTGAGTGACTATGATCAGTTTTCTGTGGATGGAAACAAGATGATATTGAGCATGAAGTTTTTTGAAACAATTGTCACTCATCCAACTTTTGAGCACATGGAATTCCTGTTGATATTGAACAAATTTGATCTATTTGAGGAGAAAATTGAACAAGTTCCTTTGACCAAATGTGATTGGTTCTCTGATTTTCATCCAATAACTAGTCGCAATCGCACCAACAGCAATAGCAACAGCATTAATAATAATCCCTCCCTTGGTCACCTGGCTTCCCATTACATAGCAGTTAAGTTTAAAAGACTTTATTCATCTCTTACAGGACGAAAGTTGTATGTTTCTGTGGTGAAAGGGTTGGAACCAGGTAGTGTTGATGCATCGCTTAAATATGCCAAGGAAATTTTGAAGTGGAATGAAGAGAAACCAAATTTTAACTCAAGTGAGTACTCAATGTATAGCACTGAGGCGAGTTCATTCTCTCATTGA 2787 0.4123 MSPAPEYSFAVEYDGPPISYDLPRALPITVDNIPVASVVSQVPLSDTLSLPVVQPLLPPHHHTVKELKTLSSESRVSKELELASERTVSPTSVIAFDHRASQINVCELSGELSSSGPFDLSNGNDGSGECEFSDVCDSSRLLEESSSSELRGGVCRSTRSFNTMEFNALGVSNDDEKESFDFNELNLNQQDWCSTESVLSLEYPSTRVSSLKAEDCDGRRVPAVSFNVDYDDDDDGDLNEEFDVEETVTRPVRREPLTKGKKGSCYRCFKGNRFTDKEVCLVCDAKYCSNCVLRAMGSMPEGRKCVTCIGFPIEESKRGNLGKCSRMLKRLLNQLEVRQIMKAERFCEANQLPPDYISVNGKPLSYEELITLQNCTNPPKKLKPGNYWYDKVSGFWGKEGQKPSSIISPHLNVGGPIQPDASNGNTQVFVNGREITKVELRMLQLAGVQCAGNPHFWVNEDGSYQEEGQKNTRGYIWGKAGTKLVCAFLSLPVPSKSSNSIGEQHSNMASRSIPDYLEHGIVQKLLLVGCSGSGTSTIFKQAKILYKSIPFSEDEHENIILTIQSNVYTYLGILLEGRERFEDEILADLKKSQSCVLDTTGTSPKPDDKTIYSIGPRLKAFSDWLLKTMASGKLDAIFPAATREYAPLIEELWNDAAIKATYERRSELEMLPSVASYFLERAVKILRTDYEPSDLDILYAEGVTSSNGLACVEFSFPQAASEETMDTTDQHDSLASRYQLIRVHARGLGENCKWLEMFEDVEMVIFCVSLSDYDQFSVDGNKMILSMKFFETIVTHPTFEHMEFLLILNKFDLFEEKIEQVPLTKCDWFSDFHPITSRNRTNSNSNSINNNPSLGHLASHYIAVKFKRLYSSLTGRKLYVSVVKGLEPGSVDASLKYAKEILKWNEEKPNFNSSEYSMYSTEASSFSH 928
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00536 928 ProSiteProfiles G-alpha domain profile. 521 919 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Car08g00536 928 PANTHER GTP-BINDING PROTEIN ALPHA SUBUNIT 7 926 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Car08g00536 928 Gene3D - 698 909 IPR027417 -
Car08g00536 928 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 524 905 IPR027417 -
Car08g00536 928 SMART galpha_1 492 886 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Car08g00536 928 CDD G-alpha 523 905 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Car08g00536 928 SUPERFAMILY Transducin (alpha subunit), insertion domain 551 700 IPR011025 GO:0007165
Car08g00536 928 Gene3D - 552 697 IPR011025 GO:0007165
Car08g00536 928 PRINTS Alpha G protein (transducin) signature 524 539 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Car08g00536 928 PRINTS Alpha G protein (transducin) signature 761 789 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Car08g00536 928 PRINTS Alpha G protein (transducin) signature 804 813 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Car08g00536 928 PANTHER EXTRA-LARGE GTP-BINDING PROTEIN 7 926 - -
Car08g00536 928 Pfam G-protein alpha subunit 522 899 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00536 Car-Chr8 4523598 4529760 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00536 - - aprc:113868364 1569.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g00536 08 4523598 4529760 Car08g00536 08 4523598 4529760 ECH