Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00480 ATGGATCAAAAGCATTGGCATTGGGGGAAAAATTCAAGGGAGAAGACAATTTTAGAAACTGACAAAGCAAATCTTACTTCAAAAGAAAATGAAGAGGTGCAGACACTTCTGGCTGATAAAGAACAATTGGAGAAAGACTTAAAAAAATTAAACGATAAGCTTGATTTTACACTCTCTAATTACAATGCTAAAGACGAGCATATGAAGAAACAAACAAAAATTGTTCAAGAAGCAGTGTCGGGATGGGAGAAGGCAGAAGTTGAAATGTTGTCAATGAAGGAACATCTTGAGGAATCTATACACCATCAACTAATTTATGAAGAAAGAATGTTTCATGTGAATTGTACTCTCAAGGAATGTATGCAGCAGTTACATTTTGCCAGAGAGGAACAAGAACAAAGGATTTATGATGCTGTAATGAAGGCTTCAAAACAATTTGATCAAGCTCGCACGGTTTTAGAGGAGCAGCTATCAGAGACCAGTAAAAGGCTTGCAAAAGTTGTGATCGAAAATTCTTATCTTAATAAATCTCTTGCTGCGAAAGACAATTTGACAGAAGATCTGAAAAGACAGTTGGCTCATGCAGAAGCAGGTCATAATGCATTGATGATTAGATTAGAGTCCATCGAAAGAGATAATAATTCTTTGAAGTACGAGGCTCGAGTGGTTCAAAAGGAACTTGATATCAGAAATGAGGAGCGAGAATATAATCGTCGAACTGCTGATGCTTCTTATAAGCAGCAATCAGAGAGTGTAAAAACAATTGTCAAGTTAGAATCAGAATGTCAGAGGCTGCGTCATCTGGCCTGGAAACGGTTGCCAAGTCCTGCTGCCAGTTTAATGGCTGAAGATTCTTCTGAGACTGCCATGAAAAGAATCACTTATTTGACTGAACAACTATGTGCCGTGGAAGAAGAAAACAAGACTTTGAAAGAATCACTAAGTAGGAAAATGAATGAAATCCAATTTTCAAGAGTAATGCTTTCGCGCACAGCTTCTAAACTGTTGCAACTTGAGTCGGAAATTGCATCTAAAAGTCAAGTAGCCTTGGAGCAGCCTAGAATTAATCTTGCATTGCAAGAGTTATGTTCGGCGTCGATGTCTGAGATTGGTAGTTATGACAATGTTAGCTGTGCGGAATCCTCGGCTATTGCAGAACTGGAGCGCttcagaagtgttggcccttcagatataaaccttagggacgatttcattgaaattgaaaAATTAGCATTGTCTGATCATCACTCCGTGTTCTCGATATCGAATCAGGAAACATGTTCCAAAGACATGTTAAAGGGTTATATTCCTGGTTGGTTTCAGGATGTAGTTAAAGTGACATTGGAACAAAATTGTGTTACTCATAAGAACCCTGATGATATACTCGAGGATATTAATTTGGCTATGAAGCATCTGAATAATAATTCAGATCAATGTACATTTGATTCAGGCAAAGATTCTAGTCAATTTGATGCATCTAATCCTTCTCATTTAAGCCTCCACACCTCGGCGGAACCTTTGAATTATTCTGTGGTAGATTCATCGGGTGAAGTAAATGATGCCGGGACTTCATCAATAAAGAGAACTAAACATAAATCTCAAAGAGTTCTGAATAAATCAATAGGCAAATTAATTGAGCTTATTGAAGGGATCAATATGCCTTCTGATGATAATAATAATTCAGATCTTTCGTGCAAAAGAGATCAAAATATCCATTCACATAATAATCAAGGAGTGTCGATAGGCTACATGGTTCGTGTTTTCCAGTGGAAAACATCGGATCTAGGTGATGTCTTGCAGAAGTTTCTCAATGTGTGTTACAATTTACTGAATGGCGTGGCTGATCATGAAAAATTTGCCACAGAACTAACAACAGCCTTGGAATGGATTATCAATCACTGCTTTTCACTTCAGGATGTTTCGAGTATGGAGGATGCAATTAAAAAACAATTTGATTGGGACGAGACCCTAACTTATTCAGGTTGTCATGATTATCCAACTCAAAAGATGCAATATGATCAGAAGGAAGAATCTAAAAATAGTAAAGATAAACCGAACAGTTCTGAATCTGAAAAGAAAGCCTTGGAGCGGAGGCTTCAAACCAATGCAAATCAACATCAGGAATTAGAGGAAACTATTGCCTGCTTGAGATTGGAGTTACAAACATTCAAAGAATCCAATAGAATACTTGAAGATCGAATACAAAATGACGCGTCCATAAATAAAGATCTTGACACTCAGCTTATAGAAACTGAATTAAAAGAGGCTTATCACAAGATTTTAGCATTAGAAGTGGAACTAGAGAGCAAGAACCATTATTGTGATGAATTAGACATAAAATGTGTTGAACTTCAGCTCCAACTTGAAAGCATGAAAAGGGAGTGTTCAAATGGTTACATTAATCTGAAAAATGAGCCGGTGCGAACTGAATGGGAGATAACAGTTGCTTCAGAGAAGTTGGCAGAGTGTCAAGAAACAATCATTCACCTTGAGAAGCAGTTGAAAGCATTGGCTGAAAGAAAGGATGTTTGTCTTTTCGACAACATTATCGCTGCTCATCGTCCGATAATTACAAACACAACTAGTGTTAGTGTCCCACTAAAAGTAGACACGAAGGCCAAAAATCGACCTTCTCTGTTGGATCAGATGCTTGCTGACGATGATGCAAAAGCCAAGGTTTGCAAAACAAGTGAAAGAAGTTTTATACAACAGCCACTTGAAAAGATTGTGGTTTTGAAAGGACTTAAAGGGCGTGAGGATGGTGCTAATGTAAAATCTTTGGCCATTTTACCTGTCAAGAAATCTGGAGGAAGAAGCTTGTGGAAAAGGCTATTAGGGAAAAGAAGAAAGCCAAAAAGAAAACATGTGTATCAGTTTAACAAGTGA 2886 0.369 MDQKHWHWGKNSREKTILETDKANLTSKENEEVQTLLADKEQLEKDLKKLNDKLDFTLSNYNAKDEHMKKQTKIVQEAVSGWEKAEVEMLSMKEHLEESIHHQLIYEERMFHVNCTLKECMQQLHFAREEQEQRIYDAVMKASKQFDQARTVLEEQLSETSKRLAKVVIENSYLNKSLAAKDNLTEDLKRQLAHAEAGHNALMIRLESIERDNNSLKYEARVVQKELDIRNEEREYNRRTADASYKQQSESVKTIVKLESECQRLRHLAWKRLPSPAASLMAEDSSETAMKRITYLTEQLCAVEEENKTLKESLSRKMNEIQFSRVMLSRTASKLLQLESEIASKSQVALEQPRINLALQELCSASMSEIGSYDNVSCAESSAIAELERFRSVGPSDINLRDDFIEIEKLALSDHHSVFSISNQETCSKDMLKGYIPGWFQDVVKVTLEQNCVTHKNPDDILEDINLAMKHLNNNSDQCTFDSGKDSSQFDASNPSHLSLHTSAEPLNYSVVDSSGEVNDAGTSSIKRTKHKSQRVLNKSIGKLIELIEGINMPSDDNNNSDLSCKRDQNIHSHNNQGVSIGYMVRVFQWKTSDLGDVLQKFLNVCYNLLNGVADHEKFATELTTALEWIINHCFSLQDVSSMEDAIKKQFDWDETLTYSGCHDYPTQKMQYDQKEESKNSKDKPNSSESEKKALERRLQTNANQHQELEETIACLRLELQTFKESNRILEDRIQNDASINKDLDTQLIETELKEAYHKILALEVELESKNHYCDELDIKCVELQLQLESMKRECSNGYINLKNEPVRTEWEITVASEKLAECQETIIHLEKQLKALAERKDVCLFDNIIAAHRPIITNTTSVSVPLKVDTKAKNRPSLLDQMLADDDAKAKVCKTSERSFIQQPLEKIVVLKGLKGREDGANVKSLAILPVKKSGGRSLWKRLLGKRRKPKRKHVYQFNK 961
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00480 961 Coils Coil 206 226 - -
Car08g00480 961 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 658 956 - -
Car08g00480 961 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 413 657 - -
Car08g00480 961 MobiDBLite consensus disorder prediction 669 695 - -
Car08g00480 961 PANTHER FILAMENT-LIKE PLANT PROTEIN 413 657 - -
Car08g00480 961 Coils Coil 774 794 - -
Car08g00480 961 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 1 412 - -
Car08g00480 961 Coils Coil 692 733 - -
Car08g00480 961 Coils Coil 26 60 - -
Car08g00480 961 Coils Coil 813 840 - -
Car08g00480 961 PANTHER FILAMENT-LIKE PLANT PROTEIN 658 956 - -
Car08g00480 961 PANTHER FILAMENT-LIKE PLANT PROTEIN 1 412 - -
Car08g00480 961 Pfam Filament-like plant protein, long coiled-coil 281 839 IPR008587 -
Car08g00480 961 Pfam Filament-like plant protein, long coiled-coil 64 278 IPR008587 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00480 Car-Chr8 4036737 4041662 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00480 - - cam:101513988 1837.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g01428 07 13536723 13541567 Car08g00480 08 4036737 4041662 ECH
Car08g00480 08 4036737 4041662 Car08g00480 08 4036737 4041662 ECH
Car06g01750 06 17311934 17316204 Car08g00480 08 4036737 4041662 ECH
Car08g00480 08 4036737 4041662 Car07g01428 07 13536723 13541567 PCT