Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00475 ATGACACTGACCATGGAGAATCAAAATTCGTCGAAACTAAAATCAATTTTCCTTCCATTTCTGTCAACAAGTCACATAATTCCCTTAGTAGATATGGCAAGACTCTTCGCTCTCCACGATGTAGAAGTAACCATTATCACTACAAAATACAATTCCACCATTTTTCAAAACTCCATTGATCTCGATTCATCTCGTGGTAGATCCATCACAACCCATATAATTGATTTTCCATCATCCAAACTTGGTCTTCCAATAGGAATCGAATCTTTCAATGTCAACACACCACGTGAAATGATTCCAAAAATCTACACGGCAATTTTCATTCTCCAACCAGAAATCGAACATCTTTTTAATGTTTTAAAACCTGATTTCATTGTTACTGACATGTTTTATCCTTGGACAGTTGAAGTCGCCGAGAAACTCGGGATTCCTAGGATTATGTTTCACGGCGCAAGTTATCTAGCTCGCTCTGCTGCGCATGCTGTGGAACAATACGCACCCCATTTGAAAACTCAATCCGATACTGAAAAATTTGTTATACCGAATTTACCTGATGAATTGATGATGACTCGTTTGCAGTTACCGGATTGGCTTAGATCACATAATCAATACACTGACTTAATGAAAGTGATTAAAGAATCTGAGAGAAAAAGTTTTGGTTCTGTTTTTAATAGTTTTTATGAACTTGAAAGTGATTATTTTGATCATTATAAAAGAGTTATGGGAACAAAAAGTTGGGGACTTGGTCCTGTTTCTTTGTGGGTTAATCAAGATGATTCAGATAAAGCTGCAAGAGGGTATTCAAaagaagaagaagaagaaaaagaagaagGGTGGTTGAAATGGTTGAATTCAAAACCAGAGTGTTCTGTTTTATATGTTAGTTTTGGGAGTATGAACAAGTTTCCTTTTTTACAATTAGTTGAAATTGCACATGCACTTGAAGATTCAGGTCATAATTTCATTTGGGTTGTGAGAAAAAATGAAGAAAATGAAGAAAGTGATGTTTTTTTGGAGGAGTTTGAGAAGAGAGTGAGAGAGAGTGAAAAGGGTTATTTAATTTGGGGTTGGGCCCCACAGCTTTTGATTCTTGAGAATCAAGCAATTGGAGGGTTAGTGAGTCATTGTGGTTGGAACACTGTTGTTGAGAGTGTGAATGTTGGGTTACCAACAGTTACATGGCCTTTGTTTGCTGAACATTTTTTCAATGAGAAGCTTGTGGTTGATGTGTTGAGAATTGGTGTTTCTGTTGGAGCTAAAGAATGGAGGAATTGGAATGAGTTTGGAAGTGAGGTTGTGAAGAGGGAAGATATTGGGAATGCTATTGGTTTGATGATGAATGGTGGTGAGGAAGAAATTGGTATGAGAAAAAGAGCTAAGGAGTTAAGTGTTGCTGCTAAGAAAGCTGTTCAAGTTGGTGGTTCTTCTTACAATAATATGGTGGAATTGATTCAAGAGCTTAAGTCAATCAAACTTGCCAAGGTTCAAGCTTAG 1494 0.3635 MTLTMENQNSSKLKSIFLPFLSTSHIIPLVDMARLFALHDVEVTIITTKYNSTIFQNSIDLDSSRGRSITTHIIDFPSSKLGLPIGIESFNVNTPREMIPKIYTAIFILQPEIEHLFNVLKPDFIVTDMFYPWTVEVAEKLGIPRIMFHGASYLARSAAHAVEQYAPHLKTQSDTEKFVIPNLPDELMMTRLQLPDWLRSHNQYTDLMKVIKESERKSFGSVFNSFYELESDYFDHYKRVMGTKSWGLGPVSLWVNQDDSDKAARGYSKEEEEEKEEGWLKWLNSKPECSVLYVSFGSMNKFPFLQLVEIAHALEDSGHNFIWVVRKNEENEESDVFLEEFEKRVRESEKGYLIWGWAPQLLILENQAIGGLVSHCGWNTVVESVNVGLPTVTWPLFAEHFFNEKLVVDVLRIGVSVGAKEWRNWNEFGSEVVKREDIGNAIGLMMNGGEEEIGMRKRAKELSVAAKKAVQVGGSSYNNMVELIQELKSIKLAKVQA 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00475 497 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 122 408 IPR002213 GO:0008194
Car08g00475 497 PANTHER GLYCOSYLTRANSFERASE 8 492 - -
Car08g00475 497 Gene3D Glycogen Phosphorylase B; 269 468 - -
Car08g00475 497 Gene3D Glycogen Phosphorylase B; 16 480 - -
Car08g00475 497 CDD GT1_Gtf-like 16 484 IPR002213 GO:0008194
Car08g00475 497 ProSitePatterns UDP-glycosyltransferases signature. 357 400 IPR035595 -
Car08g00475 497 PANTHER SOYASAPOGENOL B GLUCURONIDE GALACTOSYLTRANSFERASE 8 492 - -
Car08g00475 497 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 17 489 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00475 Car-Chr8 3970154 3971843 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g00475 5 491 Glycosyltransferase AT2G15480 40.800 6.89e-124 369
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00475 - K18822 gmx:100777250 768.459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g00475 08 3970154 3971843 Car08g00475 08 3970154 3971843 ECH