Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00374 ATGGCACTGAGGATGTGGGCTTCTTCAACTGCCAATGCACTCAAACTCTCTTCTTCTTCTTCCTCCAAGTTACCTCCTTTTTCCCTCTCCAGATCTTTCTCTTCTGTTTTGGATGGACTCAAGTACTCATCTTCACATGAATGGGTGAAGCATGAAGGATCAATAGCCACAATTGGTATCACTGATCATGCCCAGGAACATCTTGGAGAGGTTGTGTTTGTGGAGCTTCCAGAAGCTGGTGGTTCAGTTAGCAAGGGTAACGGTTTTGGAGCAGTTGAAAGTGTTAAGGCAACAAGTGATGTAAACTCTCCAATATCTGGTGAGATTGTTGAGGTTAATGACAAACTCACAGGAAAGCCTGGTCTGATCAACTCAAGCCCATATGAAGATGGATGGATGATCAAAATAAAGCCAAGTAGTCCAACTGAATTAGATTCATTGTTGGGTGCAAAGGAGTACACAAAATTTTGTGAGGAAGAAGATGCTGCTCATTAA 495 0.4263 MALRMWASSTANALKLSSSSSSKLPPFSLSRSFSSVLDGLKYSSSHEWVKHEGSIATIGITDHAQEHLGEVVFVELPEAGGSVSKGNGFGAVESVKATSDVNSPISGEIVEVNDKLTGKPGLINSSPYEDGWMIKIKPSSPTELDSLLGAKEYTKFCEEEDAAH 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00374 164 Hamap Glycine cleavage system H protein [gcvH]. 37 158 IPR002930 GO:0005960|GO:0019464
Car08g00374 164 CDD GCS_H 42 136 IPR033753 -
Car08g00374 164 PANTHER GLYCINE CLEAVAGE SYSTEM H PROTEIN 1 164 - -
Car08g00374 164 ProSitePatterns 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 80 109 IPR003016 -
Car08g00374 164 SUPERFAMILY Single hybrid motif 36 159 IPR011053 -
Car08g00374 164 Gene3D - 28 160 - -
Car08g00374 164 TIGRFAM gcvH: glycine cleavage system H protein 38 161 IPR017453 GO:0005960|GO:0019464
Car08g00374 164 PANTHER GLYCINE CLEAVAGE SYSTEM H PROTEIN 1 164 IPR002930 GO:0005960|GO:0019464
Car08g00374 164 Pfam Glycine cleavage H-protein 40 159 IPR033753 -
Car08g00374 164 ProSiteProfiles Biotinyl/lipoyl domain profile. 55 137 IPR000089 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00374 Car-Chr8 3046994 3048221 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00374 K02437 - vvi:100259229 261.536