Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00363 ATGGATGAGTTACCGGGATATGTGCGTACCTGTTTGAATACAGGGAAGCTTGTCTTTTTGGCAATTTTGGTCTCAGGAGGAATTGTCTTGCAAGTTTTGGCATGTGCTTTGTATAATAATTGGTGGCCGATGCTTAGTGCGATTACATATGTGCTTCTTCCAATGCCTTTGCTGTTCTTTGCTGGGTCTGATGGTTCTTCTATGTTTTCTGAATCTGATAATAGCTGGGTGAATTTCGGCAAGTTCTTGACAGGAGCCTCAACTCTCGGAGGCATTGCCATTCCAAGTATATTAAAGCATGCTGGGGTGATCGGTTGGGCAGCCTTTGCAATGGAAATCTCTTCTTTCTTTGTGTTTATATTAGCCATATTGTGTTTCCTGTGGATGAGTGATGAAGATTATTACAGCATGCTATGA 417 0.4197 MDELPGYVRTCLNTGKLVFLAILVSGGIVLQVLACALYNNWWPMLSAITYVLLPMPLLFFAGSDGSSMFSESDNSWVNFGKFLTGASTLGGIAIPSILKHAGVIGWAAFAMEISSFFVFILAILCFLWMSDEDYYSML 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00363 138 Pfam Vacuolar protein sorting 55 17 133 IPR007262 -
Car08g00363 138 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 55 HOMOLOG 1 134 - -
Car08g00363 138 PANTHER LEPTIN RECEPTOR-RELATED 1 134 IPR007262 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00363 Car-Chr8 2951610 2953808 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g00363 1 136 EF-hand Containing Proteins AT1G32410 67.391 1.28e-66 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00363 - - gmx:100500037 235.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g00363 08 2951610 2953808 Car07g01319 07 12114537 12116701 PCT