Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00359 ATGACATTCATACATACGAACCAAACTTTGGGAAAGCATATGGCTTCTTCGGAGAATGGCGTCGATAGCAAGAGTTCTCTCACCAGACTTGTTCCACTTGAAGCAGTGCTCTTTGATATAGATGGAACTCTTTGTGATTCTGATCCACTCCACTATTATGCCTTCCGTGAAATGCTCCAAGAGATTGGTTTCAATGGAGGTACCCCTATAACAGAGGAATTTTTTATTGCAACTGTTGCTGGCAAGCACAATAATGACATTGCTTTGGCTCTCTTTCCTGGTGATTTGGAGCGAGGTTTAAAGTTTCTAGATGATAAGGAAGCCATGTTTCGGAGATTAGCGTCTGAACAACTGAAGCCTTTAAATGGCCTTGAAAAAGTGAGGAAATGGGTTGAAAGTCGCGGGTTGAAGCGAGCTGCCGTTACCAATGCTCCAAGACCAAATGCAGAACTCGCTCTCTCAAAACTTGGCCTCTCAGATTTCTTTGATGCGGTTATTATTGGTGATGAATGTGAACATGCCAAGCCTCATCCAGATCCCTACTTGAAAGGTCTTGAAGCTCTGAAGGCATCTAAGGACCACACATTTGTATTTGAGGATTCGGTTTCAGGAATCAAAGCTGGAGTAGCGGCGGGGATGCCTGTTATAGGTATATCTACCCGAAACCCAGAGGATTTACTGATGGGAGCAAAGCCTGCCTTTCTGATTAAGGATTATGATGATCCAAAATTGTGGGCAGCTTTGGAAGAACTTGACAAGTCTAGTTCTCATTAA 774 0.4341 MTFIHTNQTLGKHMASSENGVDSKSSLTRLVPLEAVLFDIDGTLCDSDPLHYYAFREMLQEIGFNGGTPITEEFFIATVAGKHNNDIALALFPGDLERGLKFLDDKEAMFRRLASEQLKPLNGLEKVRKWVESRGLKRAAVTNAPRPNAELALSKLGLSDFFDAVIIGDECEHAKPHPDPYLKGLEALKASKDHTFVFEDSVSGIKAGVAAGMPVIGISTRNPEDLLMGAKPAFLIKDYDDPKLWAALEELDKSSSH 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00359 257 Gene3D - 34 241 IPR023214 -
Car08g00359 257 CDD HAD_BPGM-like 35 218 - -
Car08g00359 257 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE DOMAIN-CONTAINING PROTEIN SGPP 15 255 - -
Car08g00359 257 Gene3D Putative phosphatase; domain 2 48 116 IPR023198 -
Car08g00359 257 SFLD Haloacid Dehalogenase 33 241 - -
Car08g00359 257 TIGRFAM HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 106 218 IPR006439 -
Car08g00359 257 PANTHER 6-PHOSPHOGLUCONATE PHOSPHATASE 15 255 - -
Car08g00359 257 SFLD C1.5.6: HAD, Beta-PGM, Phosphatase Like 33 241 - -
Car08g00359 257 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 33 44 IPR006439 -
Car08g00359 257 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 131 144 IPR006439 -
Car08g00359 257 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 162 178 IPR006439 -
Car08g00359 257 Pfam Haloacid dehalogenase-like hydrolase 36 218 IPR041492 -
Car08g00359 257 SUPERFAMILY HAD-like 31 250 IPR036412 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00359 - - cam:101496926 516.924
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g00359 08 2937330 2939590 Car08g00359 08 2937330 2939590 ECH