Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00355 ATGGCGGATTCAGTTGAGCTTCCGAATCGGTTAGCAATACTTCCATTCAGAAACAAAGTTCTCTTACCTGGCGCCATCATCCGAATTCGTTGCACTTCACCTACCAGTGTAAAGTTGGTGGAACAAGAACTGTGGCAGCGTGAAGAGAAAGGGTTGATTGGAATCTTACCAGTACGTGATTCTGCTTCTGCTGCTGAAACTAAGCCACCACTGGGTCCCACTTTATCTCAAGGTGTAGATTCTCTAGACCAAAGCTCAAAAACTCATGGTGGTTCATCAGATTCTCATGCCAAAATTCAGCACGATGTTGTTCATTGGCATAATAGGGGGGTAGCTGCTCGAGCATTACACTTGTCCAGGGGAGTGGAGAAACCAAGTGGGAGGGTCACATACATAGTTGTTCTTGAAGGTTTGTGCAGATTTAGTGTCGAGGAACTAAGCACAAGAGGAGCATACCATACTGCTAGAATCTCTTCTCTTGAGATGACTAAGACTGAGATGGAACAGGTGGAGCATGACCCGGATTTCATAATGTTATCACGTCAATTTAAAGCAACTGCCATGGAGCTTATTTCTGTTCTGGAGCAGAAACAAAGTACTGGTGGAAGGACGAAAGTTCTTTTGGAGACTGTTCCTGTTCACAAGTTGGCTGATATATTTGTTGCTAGCTTTGAGATAAGTTTTGAAGAACAATTATCAATGTTGGATTCTGTTGATGCTAAAGTGAGGCTTTCAAAAGCAACTGAATTGGTTGATAGGCACTTACAGGCAAGTCATACATCAATTCGTGTAGCTGAGAAAATTACACAAAAAGTTGAAGGACAACTGTCAAAATCTCAAAAAGAATTTCTTCTGCGTCAGCAGATGAAGGCTATAAAAGAGGAACTTGGGGATAATGATGATGAGGAGGATGACCTGGCTGCCCTAGAAAGGAAGATGCAAAAGTTAAGGAGACTGAAAAAAATGCAGCCTCAGCAACCTGGGTATAACAGTTCACGGACTTACCTGGAACTTCTTGCTGATCTGCCATGGCAGAAGGCCAGCAAAGAGCATGAACTGGACTTAAGAGCTGCACAAGAGCGCCTCGACAGCGATCACTATGGTTTAGTTAAGGTCAAGCAACGGATCATTGAATACCTAGCTGTTCGTAAGCTTAAGCCAGATGCAATGGGTCCTGTGTTGTGCTTCGTCGGACCTCCCGGTGTTGGGAAAACATCATTGGCATCTTCTATTGCTGCTGCTTTGGACCGAAAATTTGTGCGCATATCCCTTGGAGGAGTCAAGGATGAGGCTGATATTAGAGGACATAGGAGAACATACATTGGAAGCATGCCTGGGAGGCTTATAGAGGGGCTGAAGAGAGTTAGTGTATGCAATCCCGTCATGTTGCTTGATGAAATCGACAAGACAGGTTCTGATGTTCGTGGGGATCCAGCTTCAGCACTGCTGGAGGTTCTTGATCCTGAGCAAAATAAAACATTCAATGACCACTATTTGAATGTTCCATTCGATCTATCCAAGGTAATTTTTGTTGCTACGGCAAATAAGGCGCAACCGATTCCTCCACCTCTCCTTGACAGGATGGAAGTCATTGAGCTTCCAGGGTACACACCAGAGGAAAAGCTTAAAATAGCCATGCGGCATTTAATTCCAAGAGTTCTGGATCAACATGGATTGAGTTCTGAGTTTCTTCAAATTCCAAAGGCAATGGTGCAACTTGTTATTCAGAGATATACTAGGGAAGCTGGTGTGCGAAATTTGGAAAGGAATCTAGCTGCTCTTGCTCGTGCTGCTGCAGTAAGAGTAATAGAGCAGGAACAGGTAGTTCCACTCAACAAAGGAGTAGAGAGACTTACTACACCACTTCTAGAAAACAGACTTGTTGATGGCGCTGAAGTGGAAATGGAAGTGATACCAATGGGAGTCAACAACCGTGACATTTCAAACACATTTAGAACCACCTCTTCTCCATTGGTTGTTGATGAAGCTATGGTTGAAAAAGTGCTTGGGCCCCCAAAGTTTGATGGAAGAGAAGCAGCAGAACGTGTTGCATCCCCTGGGATATCTGTTGGGCTGGTTTGGACTACTTTTGGTGGAGAAGTTCAGTTTGTGGAGGCTACAGAAATGGTAGGGAAGGGTGAATTGCATCTTACCGGACAACTTGGTGATGTTATCAAAGAATCAGCTCAAATCGCACTAACATGGGTAACCCACCTATATCTTAATAAGTTTCAACCCACCTTTGTCTTGATTGTGTCTTACAATAAATAG 2271 0.4386 MADSVELPNRLAILPFRNKVLLPGAIIRIRCTSPTSVKLVEQELWQREEKGLIGILPVRDSASAAETKPPLGPTLSQGVDSLDQSSKTHGGSSDSHAKIQHDVVHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVEELSTRGAYHTARISSLEMTKTEMEQVEHDPDFIMLSRQFKATAMELISVLEQKQSTGGRTKVLLETVPVHKLADIFVASFEISFEEQLSMLDSVDAKVRLSKATELVDRHLQASHTSIRVAEKITQKVEGQLSKSQKEFLLRQQMKAIKEELGDNDDEEDDLAALERKMQKLRRLKKMQPQQPGYNSSRTYLELLADLPWQKASKEHELDLRAAQERLDSDHYGLVKVKQRIIEYLAVRKLKPDAMGPVLCFVGPPGVGKTSLASSIAAALDRKFVRISLGGVKDEADIRGHRRTYIGSMPGRLIEGLKRVSVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANKAQPIPPPLLDRMEVIELPGYTPEEKLKIAMRHLIPRVLDQHGLSSEFLQIPKAMVQLVIQRYTREAGVRNLERNLAALARAAAVRVIEQEQVVPLNKGVERLTTPLLENRLVDGAEVEMEVIPMGVNNRDISNTFRTTSSPLVVDEAMVEKVLGPPKFDGREAAERVASPGISVGLVWTTFGGEVQFVEATEMVGKGELHLTGQLGDVIKESAQIALTWVTHLYLNKFQPTFVLIVSYNK 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00355 756 CDD AAA 375 536 - -
Car08g00355 756 Gene3D - 2 161 IPR046336 -
Car08g00355 756 Gene3D - 678 753 IPR014721 -
Car08g00355 756 Pfam ATP-dependent protease La (LON) substrate-binding domain 11 253 IPR003111 -
Car08g00355 756 SUPERFAMILY Ribosomal protein S5 domain 2-like 686 744 IPR020568 -
Car08g00355 756 Gene3D - 355 533 IPR027417 -
Car08g00355 756 SUPERFAMILY PUA domain-like 10 252 IPR015947 -
Car08g00355 756 ProSiteProfiles Lon proteolytic domain profile. 683 756 IPR008269 GO:0004176|GO:0004252|GO:0006508
Car08g00355 756 PANTHER LON PROTEASE HOMOLOG 2, PEROXISOMAL 1 737 - -
Car08g00355 756 PANTHER ATP DEPENDENT LON PROTEASE FAMILY MEMBER 1 737 IPR027065 GO:0004176|GO:0004252|GO:0005524|GO:0030163
Car08g00355 756 PIRSF Lon_proteas 634 749 IPR004815 GO:0004176|GO:0005524|GO:0006508
Car08g00355 756 PIRSF Lon_proteas 1 626 IPR004815 GO:0004176|GO:0005524|GO:0006508
Car08g00355 756 MobiDBLite consensus disorder prediction 63 96 - -
Car08g00355 756 Gene3D - 534 674 - -
Car08g00355 756 PRINTS Endopeptidase La (Lon) serine protease (S16) signature 398 417 - -
Car08g00355 756 PRINTS Endopeptidase La (Lon) serine protease (S16) signature 686 702 - -
Car08g00355 756 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 342 609 IPR027417 -
Car08g00355 756 TIGRFAM lon: endopeptidase La 13 742 IPR004815 GO:0004176|GO:0005524|GO:0006508
Car08g00355 756 ProSiteProfiles Lon N-terminal domain profile. 11 253 IPR003111 -
Car08g00355 756 SMART lon_5 10 253 IPR003111 -
Car08g00355 756 Coils Coil 292 319 - -
Car08g00355 756 Pfam Lon protease (S16) C-terminal proteolytic domain 660 737 IPR008269 GO:0004176|GO:0004252|GO:0006508
Car08g00355 756 MobiDBLite consensus disorder prediction 77 93 - -
Car08g00355 756 Pfam ATPase family associated with various cellular activities (AAA) 394 531 IPR003959 GO:0005524|GO:0016887
Car08g00355 756 SMART AAA_5 390 535 IPR003593 -
Car08g00355 756 Gene3D - 172 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00355 Car-Chr8 2882169 2891183 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00355 K01338 - gmx:100796650 1239.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g00355 08 2882169 2891183 Car08g00355 08 2882169 2891183 ECH