Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00335 ATGGCTTCCCAAGTTTTTCTCCAGACTCTGTTTACCCCTAATCAATGTATTCCATCAACGAAGCTTTGTTTCTCTTCTTCTTGTGCCGCTTCTAAATTCGGTTCTCGTAACTTGCCGTTGATTTCAACTTCAATTTCACGGCGTTGTAGTCCTCTCATTGCTAAATCTACTTTTATTGTGAGAGCTGATTCCAATGATGATGCTGGTTCGGCTTCGGATATTGTCGATGAAGTTCCGGAAACTGATGCTGAACAGGTTTCAGATTCTGATCCCGAAATTGAGCAATTGAAGCCACCAAAACAAACTCGGGTTAAGCTTGGTGACGTTATGGGGATATTGCATCAGAGGGCAATTGAGGCATCGGATAAAGAGAGGGTAACTCCAGACATTAGGACTGGAGATATTGTGCAAATCAGATTGGAAGTTCCTGAGAACAAGCGTAGGTTGTCCATTTATAAAGGTATTGTAATCTCAAAACAGAATGCTGGTATTCATACCACTATTCGAATCCGAAGAATTATTGCTGGCACAGGTGTTGAGATTGTCTTCCCAGTCTACTCACCAAACATCAAAGAAATCAAAGTGGTGAACCACCGAAAGGTCAGGAAGGCAAGATTGTACTATCTAAAAGACAAGCTTCCAAGATTCTCCACTTTCAAATGA 663 0.4148 MASQVFLQTLFTPNQCIPSTKLCFSSSCAASKFGSRNLPLISTSISRRCSPLIAKSTFIVRADSNDDAGSASDIVDEVPETDAEQVSDSDPEIEQLKPPKQTRVKLGDVMGILHQRAIEASDKERVTPDIRTGDIVQIRLEVPENKRRLSIYKGIVISKQNAGIHTTIRIRRIIAGTGVEIVFPVYSPNIKEIKVVNHRKVRKARLYYLKDKLPRFSTFK 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00335 220 MobiDBLite consensus disorder prediction 67 91 - -
Car08g00335 220 Gene3D - 107 219 IPR038657 -
Car08g00335 220 Pfam Ribosomal protein L19 117 213 IPR001857 GO:0003735|GO:0005840|GO:0006412
Car08g00335 220 TIGRFAM rplS_bact: ribosomal protein bL19 118 212 IPR001857 GO:0003735|GO:0005840|GO:0006412
Car08g00335 220 PRINTS Ribosomal protein L19 signature 114 143 IPR001857 GO:0003735|GO:0005840|GO:0006412
Car08g00335 220 PRINTS Ribosomal protein L19 signature 173 196 IPR001857 GO:0003735|GO:0005840|GO:0006412
Car08g00335 220 PANTHER 50S RIBOSOMAL PROTEIN L19-1, CHLOROPLASTIC-RELATED 12 220 - -
Car08g00335 220 PANTHER RIBOSOMAL PROTEIN L19 12 220 IPR001857 GO:0003735|GO:0005840|GO:0006412
Car08g00335 220 SUPERFAMILY Translation proteins SH3-like domain 117 220 IPR008991 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00335 Car-Chr8 2637514 2640046 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00335 K02884 - gmx:100500328 259.61