Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00330 ATGATGCAAATCACCTCCACCGTACCTGCTCACAACCTCCACAAGTTTCAAGCATTAAGATGCCCCAGTTTCAGATGCCATGCTTCTTCTCCTTTAAACCCTTCCGTTAATAAATCCTTTACTTCTCTTCAAACTCACAAACCCTTTGACTCTACTCGTTTACATCTCTCCAATCTTGACAAATTCCTCGATTCccaaaacccactcgaatcaactacccaacaccaccaccaccaacaacaacaacaacCCATTCAAAAAAACGATTCAAAGGATAAAAAAGGAAAAAGCTTTCTCGAATGTCTTAACCTTGCTAAGTTATGGCCGGAAATCAAAGCAGCTGATGAAATCTCCCCGCGCCACCTCAAACGCCTTCAGCGTCTCCTTTCCAAGACGGCGGAGTATTCACCAAGAAATATTCTCGGCAGCCGGTGGAAGGAATATCACGGCAGCAACGACTGGAAAGGGATGTTAGATCCTCTCGACGATAATCTCCGCCGAGAAGTTGTTAGATACGGCGATTTAGTTCAAGCCGCGTATCAAGCCTTTCACGCCGATCCTGCCATGTCATCAACCGAACCACCCCAGCATCACCACGTGGCGTTACCTGAAAGATCATACAAAGTTACCAAGAGTCTGTATGCCACATCATCCATTGGATTACCCAAATGGATTGATGACGTGGCTCCAGATCTTGGATGGATGACCCAACATTCTAGTTGGGTCGGATACGTCGCAGTATGCGACGATAGAAGAGAGATTGCTCGAATGGGAAGAAGAGATATCGTGATATCTCTTCGTGGAACTTCCACTTGTCTCGAATGGGCCGAAAATATGAGAGCCCAATTAATCGACTTACCCGTGGataataataataataacaacaatgaaaatTCAGAAGCTCGGGCCCAGACCCAAGGAAAGCCCAAAGTTGAGTGCGGGTTTATGAGCTTGTACAAAACAAGAGGGGCCCACGTGCCGAGTCTATCCGAGTCGGTAGTGGAAGAAGTGAAGCGTCTAATGGAACTCTACAAAGGTGAAGAGTTGAGTATAACAATAACGGGCCATAGCCTTGGTGCTACACTAGCACTATTGGTGGCTGAGGAGATAAGCACGTGTGGGCCCAACGTACCACCCGTTGCTGTTTTTTCATTTGGTGGGCCTCGTGTGGGTAACAAAGCCTTTGGGGAACACCTCACACAAAAGAAGGTGAAAGTGCTTAGAATAGTGAACACACAAGATGTGATTACAAGGGTGCCAGGAATATTTTTAAGCGAAGAGCTTGAAGAAAAAATAAAAAATTCAAAGGTAGTTAGTGGAGTGGTTGATATGTTGGAAGAGAACACACCGTTGGGATATTCACACGTTGGAACGGAATTACGTGTTAATACTAAGATGTCACCGTACCTTAAGCCCGATGCTGATATAGCTTGTTGTCATGATTTGGAGGCTTATTTACATTTGGTGGATGGGTTTATTGCATCTAATTGTCCTTTTAGAGCTAATGCAAAGAGAAGTTTGGCTAGATTAATGCAAGATCAAAGTTCTAATGTAAAAAAATTGTATACTAGTAAGGCAAAGGCCTTGACTGTTAATCTTAGTAGACAGAGAtctatgtctatgtctacttgtttgcctagtccatCATCTTCATGA 1656 0.4124 MMQITSTVPAHNLHKFQALRCPSFRCHASSPLNPSVNKSFTSLQTHKPFDSTRLHLSNLDKFLDSQNPLESTTQHHHHQQQQQPIQKNDSKDKKGKSFLECLNLAKLWPEIKAADEISPRHLKRLQRLLSKTAEYSPRNILGSRWKEYHGSNDWKGMLDPLDDNLRREVVRYGDLVQAAYQAFHADPAMSSTEPPQHHHVALPERSYKVTKSLYATSSIGLPKWIDDVAPDLGWMTQHSSWVGYVAVCDDRREIARMGRRDIVISLRGTSTCLEWAENMRAQLIDLPVDNNNNNNNENSEARAQTQGKPKVECGFMSLYKTRGAHVPSLSESVVEEVKRLMELYKGEELSITITGHSLGATLALLVAEEISTCGPNVPPVAVFSFGGPRVGNKAFGEHLTQKKVKVLRIVNTQDVITRVPGIFLSEELEEKIKNSKVVSGVVDMLEENTPLGYSHVGTELRVNTKMSPYLKPDADIACCHDLEAYLHLVDGFIASNCPFRANAKRSLARLMQDQSSNVKKLYTSKAKALTVNLSRQRSMSMSTCLPSPSSS 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00330 551 MobiDBLite consensus disorder prediction 69 93 - -
Car08g00330 551 PANTHER PHOSPHOLIPASE A1-IBETA2, CHLOROPLASTIC 2 535 - -
Car08g00330 551 SUPERFAMILY alpha/beta-Hydrolases 168 492 IPR029058 -
Car08g00330 551 Gene3D alpha/beta hydrolase 144 541 IPR029058 -
Car08g00330 551 CDD Lipase_3 208 490 - -
Car08g00330 551 Pfam Lipase (class 3) 263 422 IPR002921 GO:0006629
Car08g00330 551 MobiDBLite consensus disorder prediction 69 86 - -
Car08g00330 551 PANTHER GLYCEROLIPASE A1 2 535 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00330 Car-Chr8 2613705 2615496 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g00330 35 551 Acyl Lipid Metabolism Gene Families AT4G16820 55.769 0.0 563
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00330 - - gmx:100806573 796.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g00330 08 2613705 2615496 Car04g01387 04 14124791 14130900 PCT