Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00321 ATGCCTTTGCAAGAGCAGACAGATTATGTTTGTCAGAAGGTGAGGGAAATGAATGAATTGAAGGGAGGATACAACATTGTTGGCCTCTCCCAGGGAAATTTAATTGGTCGAGGTGTGGTCGAGTTTTGTGAAGGAGGACCTCCTGTTAAGAACTTTATCTCTTTAGCTGGCCCTCATGCTGGTACTGCTTCAGTTCCCCTATGTGGTACAGGTATCCTCTGCGTCCTTGCAGACAATCTCATCAAGGGAGAGGTTTACAGTACCTATATTCAAGAACACTTGGCTCCTAGCGGATATCTTAAATTACCAAATgccatacctaaatatttGGAGAGCTGTAGGTACCTCCCTAAGCTTAATAATGAAAGACCTGCTGAGAGGAATTCCACTTACAAGGAAAGATTTAGTAGCTTGCTGAATTTGGTACTTATCATGTTTGAGCAAGACACGGTTTTAATACCGAAAGAAACATCCTGGTTTGGTTATTATCCAGATGGCTACTTCAAGCCAATTTTACCGCCGCAAGAGACAAAACTCTACACTGAAGATTGGATTGGCCTAAGAACTTTAGATGAAGCTGGCCGTGTCCATTTTGTTAGCATTGAAGGAAAACATCTGGGAATTTCTGAGACTGATATGAAGAAACATGTAGTGCCATATTTGATTGATCAATCATCAAGAAAAGATAGCACCACAAAGGCTGATTTTTGGAGGATGCATAGAGTTCATCAGAGATTTATTCAAAGCAATGCAATGGTGTAA 762 0.4029 MPLQEQTDYVCQKVREMNELKGGYNIVGLSQGNLIGRGVVEFCEGGPPVKNFISLAGPHAGTASVPLCGTGILCVLADNLIKGEVYSTYIQEHLAPSGYLKLPNAIPKYLESCRYLPKLNNERPAERNSTYKERFSSLLNLVLIMFEQDTVLIPKETSWFGYYPDGYFKPILPPQETKLYTEDWIGLRTLDEAGRVHFVSIEGKHLGISETDMKKHVVPYLIDQSSRKDSTTKADFWRMHRVHQRFIQSNAMV 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00321 253 PANTHER PALMITOYL-PROTEIN THIOESTERASE/DOLICHYLDIPHOSPHATASE 1 1 237 - -
Car08g00321 253 Pfam Palmitoyl protein thioesterase 1 205 - -
Car08g00321 253 SUPERFAMILY alpha/beta-Hydrolases 2 221 IPR029058 -
Car08g00321 253 PRINTS Palmitoyl protein thioesterase signature 21 37 IPR002472 GO:0098599
Car08g00321 253 PRINTS Palmitoyl protein thioesterase signature 153 171 IPR002472 GO:0098599
Car08g00321 253 PRINTS Palmitoyl protein thioesterase signature 198 216 IPR002472 GO:0098599
Car08g00321 253 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 237 - -
Car08g00321 253 Gene3D alpha/beta hydrolase 1 234 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00321 Car-Chr8 2556193 2561329 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g00321 1 234 Acyl Lipid Metabolism Gene Families AT3G60340 70.940 2.09e-125 358
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00321 K01074 - gmx:100809770 416.387
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g00321 08 2556193 2561329 Car08g00321 08 2556193 2561329 ECH