Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00300 ATGGCGGGAGCCATTGGAGCTACAGCTTCGTGTGTTTTCTGTGAAATAGCAGCGACGAAATCAACCTCCCATTCCATtctccactctGATGATAGGGTTGTTGCTTTTCGCGACATTAATCCATCTGCTTTCAGGCATTACTTAGTGGTTCCTGTGGAGCATATTCCTACTGTTAATGATCTTCAGAGAAAAACTGAAGACCATTCTTTGGTGAATCACATGTTAGAGGTTGGGAGAATGTTGTTAGTCAGAGATGCACCTCAGTCAAAGCAATACAGATTTGGCTTTCATCAACCTCCATTGAATTCTGTTAACCACCTACACCTCCATTGTTTCGCCCTACCATATACACCCAGATGGAGATGCATAAAATACTTGTCTTTCGGACCACTTGGTTTCATTGAAGCAGAGAAGTTTTTGGAAAAGATAAAGCCTTTGCCTGCAGTTCATTCAAAAGTATAA 462 0.4069 MAGAIGATASCVFCEIAATKSTSHSILHSDDRVVAFRDINPSAFRHYLVVPVEHIPTVNDLQRKTEDHSLVNHMLEVGRMLLVRDAPQSKQYRFGFHQPPLNSVNHLHLHCFALPYTPRWRCIKYLSFGPLGFIEAEKFLEKIKPLPAVHSKV 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00300 153 PANTHER APRATAXIN-RELATED 7 144 - -
Car08g00300 153 Pfam Scavenger mRNA decapping enzyme C-term binding 10 119 - -
Car08g00300 153 PANTHER HISTIDINE TRIAD NUCLEOTIDE-BINDING PROTEIN 3 7 144 - -
Car08g00300 153 SUPERFAMILY HIT-like 9 143 IPR036265 -
Car08g00300 153 Gene3D - 2 117 IPR036265 -
Car08g00300 153 ProSiteProfiles HIT domain profile. 12 121 IPR011146 GO:0003824
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00300 K22966 - gmx:100799719 248.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g00300 08 2366614 2368878 Car08g00300 08 2366614 2368878 ECH