Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00293 ATGAGCACCCTCCCTACAACACAAGGGAAAACTGTCCATGATGCATCCGATTTTAAGGGCCGTCCGGCAGACAGGTCCACAACCGGTGGTTGGTCTGCGGCCGCCATGATATTAGGCGGTGAAATTATGGAGAGGTTAACAACACTCGGCATCGCCGTTAATTTGGTCACATATTTGACGGGTACGATGCATTTGGGAAATGCTGCCTCTGCCAATGTTGTCACAAACTTCTTAGGAACTTCCTTTATGCTCTGTTTATTGGGCGGCTTTCTCGCCGATACTTTTTTGGGAAGATACCTTACTATTGCCATCTTTGCAGCCATTCAAGCAATGGGTGTAACAATATTGACGATATCAACTATAATTCCAAGCCTACATCCACCAAAATGCACAAAAGACTCTACAACGCCTTGTGTAGAAGCAAGCAACAAACAACTATTGGTGTTAAATTTAGCACTTTATGTAACGGCACTTGGCACAGGTGGTTTAAAATCTAGTGTCTCTGGTTTTGGTTCAGATCAATTTGATGATTCACATAAAGAAGAGAAAAAGGGTATGATTAAATTTTTCAGTTGGTTCTACTTCTTTGTAAGCATAGGGTCTTTAGCGGCAGTTACTATTCTTGTGTATATACAAGACAACCAAGGAAGAGGTTGGGGTTACGGTATTTGTGCCGTTGCTATTGTTGTAGCACTTGTTGTTTATTTGTCGGGAACAAGTAAGTACCGAATTAAACCACTTGTTGGTAGTCCATTGACTCAAATTGTACTAGTTTTTGTGGCTGCTTGGAAAAAGAGACATTTTCAATTGCCCTCTGATTCCTCATTGCTATATGAAGAGGATGATATTCAACATGAACAACCTAGGAACAAGAAGCAGAGGTTGCCGCATAGCAAGCAGTTCCGCTTCTTAGACAAAGCAGCAATCAAAGGCTTAGAAAGTACGAATGGAATCACAATGAAAGAGAAATGGCATCTTTCTACCTTAACCGATGTGGAAGAAGTAAAATTGATACTAAGGATGTTACCCATATGGGCTACCACAATAATGTTTTGGACAATCCATGCTCAAATGACAACATTCTCAGTATCACAAGCAACAACAATGGATTGTCACATTGGAAAATCATTTCAAATTCCAGCAGCATCGATGACCGTCTTTTTAATCGGAACAATTCTGTTAACAGTTCCTTTGTATGACCGATTAATTAGACCGGTCGCAAAAAACATACTTAAAAATTCAAATGGGTTCACCCCTTTGCAAAGAATTGGTGTTGGATTAGTCCTCTCTGTATTGTCTATGGTAGCAGCTGCACTCATTGAAATAAAGCGTTTGAAATTTGCAAAATCACATGGTTTTGTAAATGATCCAACGGCTAAGATGCCTTTGAGTGTATTTTGGTTGGTGCCACAATTCTTCTTTGTGGGGTCAGGAGAGGCCTTTATGTATATGGGACAATTAGACTTTTTCCTTAGAGAATGTCCTAAAGGAATGAAAACAATGAGTACAGGGTTGTTCTTGAGCACACTTTCTTTAGGATTTTTCTTTAGTTCATTATTAGTGACTATAGTGAATAATGTGACGGGTCCTAATAAGCCATGGATTGCAAATAATCTTAATCAAGGGAGGCTCTATGATTTTTATTGGCTATTGGCTATGCTAAGTGCTATAAATGTGAATTGGAAGAAATTGATGCCTCTACATTTCATGCATAGATACCTCAACATTGCCATCTTTGCAGCCGTTCAAGCAATGGGTGCAACACTATTGACAATATCAATTATAATTCCATGTCTACATCCACCAAAATGCACACAAGACTCTACAACAGTTTGTGTAAAAGCAACACGAAACAACTATTGGTGTTGTATTTAG 1875 0.3931 MSTLPTTQGKTVHDASDFKGRPADRSTTGGWSAAAMILGGEIMERLTTLGIAVNLVTYLTGTMHLGNAASANVVTNFLGTSFMLCLLGGFLADTFLGRYLTIAIFAAIQAMGVTILTISTIIPSLHPPKCTKDSTTPCVEASNKQLLVLNLALYVTALGTGGLKSSVSGFGSDQFDDSHKEEKKGMIKFFSWFYFFVSIGSLAAVTILVYIQDNQGRGWGYGICAVAIVVALVVYLSGTSKYRIKPLVGSPLTQIVLVFVAAWKKRHFQLPSDSSLLYEEDDIQHEQPRNKKQRLPHSKQFRFLDKAAIKGLESTNGITMKEKWHLSTLTDVEEVKLILRMLPIWATTIMFWTIHAQMTTFSVSQATTMDCHIGKSFQIPAASMTVFLIGTILLTVPLYDRLIRPVAKNILKNSNGFTPLQRIGVGLVLSVLSMVAAALIEIKRLKFAKSHGFVNDPTAKMPLSVFWLVPQFFFVGSGEAFMYMGQLDFFLRECPKGMKTMSTGLFLSTLSLGFFFSSLLVTIVNNVTGPNKPWIANNLNQGRLYDFYWLLAMLSAINVNWKKLMPLHFMHRYLNIAIFAAVQAMGATLLTISIIIPCLHPPKCTQDSTTVCVKATRNNYWCCI 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00293 624 Gene3D MFS general substrate transporter like domains 4 562 IPR036259 -
Car08g00293 624 PANTHER PEPTIDE/NITRATE TRANSPORTER 569 618 - -
Car08g00293 624 SUPERFAMILY MFS general substrate transporter 20 535 IPR036259 -
Car08g00293 624 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 10 559 IPR000109 GO:0016020|GO:0022857|GO:0055085
Car08g00293 624 ProSitePatterns PTR2 family proton/oligopeptide symporters signature 1. 88 112 IPR018456 GO:0006857|GO:0016020|GO:0022857
Car08g00293 624 PANTHER PEPTIDE/NITRATE TRANSPORTER 10 559 - -
Car08g00293 624 Pfam POT family 99 535 IPR000109 GO:0016020|GO:0022857|GO:0055085
Car08g00293 624 MobiDBLite consensus disorder prediction 1 29 - -
Car08g00293 624 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 569 618 IPR000109 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00293 Car-Chr8 2304267 2309612 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g00293 569 616 Organic Solute Cotransporters AT1G12110 52.083 1.37e-09 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00293 - - gmx:100813789 836.254
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g00293 08 2304267 2309612 Car08g00293 08 2304267 2309612 ECH