Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00287 ATGGCACTTAATTCACTCTCACCACTTTCAATTAATTCTCTCCATGTTTCCTCTAATTACCGTTCAACTTCCAAAATTTCAAACACGCTTCATTTTCATTCAAAGTCCTCTCCAATTGTTTGCAAAATTAACTTAAACAGTGATCATCCTCAAGAGACCAAGAAATGGGGAAAACTGTTTTCAGCCACGTTGGCAGCTGCGGTTATTGTTTTCAGCTCTGACCTTTCTGCCCTTGCCGATCTTAACAAATTTGAGGCTGAAATTAGGGGTGAATTTGGTATTGGATCTGCTGCTCAGTTTGGATCAGCAGATCTCAAGTTAGTTTCTttcattcaattaattaattcAAGAGCTAATTTCACATCTGCTGATATGAGAGAATCTGATTTTAGTGGTTCTACTTTCAATGGTGCATACCTTGAGAAAGCTGTTGCATACAAGGCAAATTTTACAGGTGCTGATTTGAGTGATACATTGATGGATCGCATGGTTCTTAATGAAGCGAATCTGACAAATGCCATTCTTGTTAGAACAGTCCTTACTCGGAGTGACCTTGGAAGTGCCATCATTGAAGGTGCTGACTTTAGTGATGCTGTGTTGGACCTTACCCAAAAGCAGGCTTTATGCAAGTATGCTAGTGGCACAAATCCTGTAACAGGAGTAAGCACAAGAGTGAGTTTAGGTTGCGGGAACAAACGACGAAATGCTTATGGCACCCCATCATCTCCCCTGTTGAGTGCTCCACCGCAGAAACTGCTTGACCGAGATGGTTTCTGCGATGAAGCAACAGGCCTTTGCGATTCAAAGTAG 810 0.4111 MALNSLSPLSINSLHVSSNYRSTSKISNTLHFHSKSSPIVCKINLNSDHPQETKKWGKLFSATLAAAVIVFSSDLSALADLNKFEAEIRGEFGIGSAAQFGSADLKLVSFIQLINSRANFTSADMRESDFSGSTFNGAYLEKAVAYKANFTGADLSDTLMDRMVLNEANLTNAILVRTVLTRSDLGSAIIEGADFSDAVLDLTQKQALCKYASGTNPVTGVSTRVSLGCGNKRRNAYGTPSSPLLSAPPQKLLDRDGFCDEATGLCDSK 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00287 269 Gene3D - 96 230 - -
Car08g00287 269 PANTHER THYLAKOID LUMENAL PROTEIN TL20.3, CHLOROPLASTIC 1 268 - -
Car08g00287 269 SUPERFAMILY Pentapeptide repeat-like 98 200 - -
Car08g00287 269 Pfam Pentapeptide repeats (8 copies) 123 159 IPR001646 -
Car08g00287 269 Pfam Pentapeptide repeats (8 copies) 165 200 IPR001646 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00287 - - gmx:100805220 431.409
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g00287 08 2259257 2261089 Car08g00287 08 2259257 2261089 ECH